Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1555 ATGACCCTTAAGGGTGGCACAACCCAAGCCTGCGCCGCATGCAAATACCAGAGAAGGAAATGTACTTCTGAGTGCCTTCTTGCTCCACACTTCCCTGCAGATCAACCCAATGTATTTCTAAATGTTCACAAACTTTTCGGAGTGAGTAACATTGTAAAGATTTTAAAGATCCTCGAGCCGAATCAGAAGCAAATAGCCATGGACTCTATCATTATTCAATCAAATTACAGGAATAAGTACCCTGTACATGGCTGTTGTGAGGAAATTTGCAGGCTACAATATCAAATTTTGTGGGCAGAAGAAGAGCTTCAAGTTGTTTATCAACAACTCGAAACATGTAGACAACAACAACAACAAAAAGAACAAGCCTCCATGGCGATTCCCCATACTAATGCGCTAACACTCTTCGATCATAGTCCACTGCCACAAACTTATGATGACTCGGTTGCTGCTGCAGCGGCTTTGCCTGTAGCACAACAACATTCCTACTCCAACAGCAACAGCATTGATTATAATAGTTCCATTTACTTGGAACCCAAGGATGAAGCCACAAATCCTTTGTGGGTTCAGCATCATCGCTACACGAATAACAACAACAATTCCATAGTAATGCAATCTCAGTTTGTTACTTCACAGCCACTAGCCATCCAACATGAAACTGTTGAAGATTATGAACAGATGCATCCACTTTTTGATGCAATTGATGATAGGCAATCATACATTTACTCCAAGGAGGCTTATGAATCAAGTTCAGAAGAATCACTGAAAGATACAAGAAACTGCATTGATGATTTTGTTGAAAATGAATTGAAGAACGCTGCCGCGTTTTTCAGCCTTACCGGGGTCAATTGA 852 0.4096 MTLKGGTTQACAACKYQRRKCTSECLLAPHFPADQPNVFLNVHKLFGVSNIVKILKILEPNQKQIAMDSIIIQSNYRNKYPVHGCCEEICRLQYQILWAEEELQVVYQQLETCRQQQQQKEQASMAIPHTNALTLFDHSPLPQTYDDSVAAAAALPVAQQHSYSNSNSIDYNSSIYLEPKDEATNPLWVQHHRYTNNNNNSIVMQSQFVTSQPLAIQHETVEDYEQMHPLFDAIDDRQSYIYSKEAYESSSEESLKDTRNCIDDFVENELKNAAAFFSLTGVN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1555 283 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lal14g1555 283 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Lal14g1555 283 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 259 - -
Lal14g1555 283 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1555 Lal-Chr14 16216725 16217734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1555 1 246 AS2 family AT3G47870 37.500 1.56e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal14g1555 LOB 1.8e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1555 14 16216725 16217734 Lal14g1555 14 16216725 16217734 ECH
Lal14g1555 14 16216725 16217734 Lal7g0951 7 15852695 15853890 LSH
Lal14g1555 14 16216725 16217734 Lal19g1107 19 14691005 14692071 LSH