Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1554 ATGGACGGTGGCGATAATTCACTGTCTGATAAGGAGGAGGAGAATGATGATGTGGACTTTACTGAGATTCTCTCGCGAGTTCGACTCGTCGATGCTCCTATACTCTTGTTCGTTTGTTTTCACAAAGCTATGCGTTCTGAACTACGATTGCTTCGTCGTATAGCCAAAACGGCGTCGTTGGAGGATGAACATCAACGAAGCCGAGAAACGATCGTTAAGCTTCGAAGTAGGTTCCAGTTTCTTAAACTAGCTCAAAAGTATCATTGCGCTGCGGAAGATGAGCTTATCTTCCGTGCACTGGATATACACGTGAAAAATGTGGCAAGTACATATTCCCTTGAACATAGTAGCACAGAGGACCTCTTTGATTCCATCTTTTACTTCTTGGATGAGCTGATGGGAACTAGTCAGAGTTTTCCAAAGTTGTTCCAAGAACTTTTGTATAGTATTGCCGTCTTGCAAACCTCCATTAACCAAAATATGCTGAAAGAAGAAAAGCAGGTTTTTCCTCTGTTGATGCAGAAATTATCTACTAAAGAACAGGCTTCACTTGTGTGGCAATTCATATGTAGCGTTCCTATAATGTTTCTAGAAGAAGTTTTGCCATGGATGGTATCCTTCCTCTCTGCAGACAAAAAAACAGAAGTCACTCAGTGTTTAAGTGAAATTGCACCAATGGAGAAAGCACTGCAAGAGGTTTTGGTTTCTTGGGTTGTAAGCAATAACCAAACCTTCGGTGAGGCCTATTTTGAAATTGAAGAAGTTCAATGTGCTGATGGTTCACTACATAAAGAAAGATCACTTAGGTTGAGTTCTTGCAATAAGAATTGCAAAGAAGTTTCCAGTTGGATGAAAATGAATGGCCTAGAAATAGAAGATGGGGTCAACCAGGTTAATGTTCTTCAACTTTGGCATGAGGCCATCAAGAAAGATTTGAAAGAAATTTTGAAGGAACTTCATCTAATAAGAAACTCCAGCTGTTTTCAGAATTTAGACGCAATAGTTACCCAAATAAATTTTTTTGCCGATGTCCTCTTCTTTTACAGCAATGCTCAGAAGACATTTTTTCATCCTTTACTGAATAAACCTGCTTATGACTGGTTGCCCAAGTCCACTGAACAGTTTCTTGGTGAAAGTCACATTGAAGATTTACAGCAGTTGTTATGTAACTCAGAAAGTGGAATGCCTTTGTGCAACTTCGTAGAAGAGCTTTGCAGAAAACTTGAATCATTTATATCCGGAGTTAAAAAACAATTTGCTTTTCAAGAAACTGAGGTATTTCCTGTCATTAAAAAGAACTGCAGAAACGGAATACAAGAGAGACTTTTGAGCTTGAGCCTGCAAATGATGCCACTTGGGTTACTTAGATGTGTTATTAATTGGTTTTCAGTTCACTTGTCTGAAAAGGAATCCATGTCCATTCTCTATTACATAAAGAAAGGAAACCATTTTGTCTGCGAAGCTTTTTCATCGCTGTTACATGAGTGGTTCTGCATTGGTTATTCAGGTAAAACCTCCATTGAGAAATTCCGACAAGACTTGCAGCATATGTTCAAAAGTAGATGGTCTTTCTTGCCTGAGAAAATTAAGGAAAGGTCTGAATTTTCTTTATTAAATTCTGGCCAGCAGCCTAATAAAGTCTCTGGTAAGAATTGTTTGTCCAATTCCTCATCTTCTGGATCCAACAACTCATACAAGTATGAGACACCGTACTCCATTGGAATTAATCTGCATATATTTTTCCCTGCCACAGTTGGGAAGTTACACCAGAGTTCTAGATTCCATGTAGGAAGTAGTTCTTCCATTTCCTTTCTCGGTGATCCAAAACCAATTGACTTAATATTTTTCTTTCACAAGGCTATCAGGAAAGACTTGGATTACCTTGTTCTTGGTTCAGCTCAGTTAGAACAAAATTCCGAGTTGCTTATGGATTTCCGCAAAAGATTCCATCTCATATGTTTTCTTCACCAAATTCATACTGATGCAGAGGACGAGGTGGTTTTCCCAGCCTTGGAGGCAAGGGGTAAGCTCAAAAACATTAGCCATGCTTACACTTTTGATCACAAACTTGATGATGAGCACTTCGATAAAGTATCCCGGATCCTTGATAAGATGTCTGAATTACATCTTCCAGTTTCTACCATTGATTCAAATGTAAGGGAGAATATAATGCTAAGGCAACATCATTTATGCAGGAAGCTTCAACAAATGTGCAAGTCAATGCATAAGTTACTTTCCGACCATTTGAACCGCGAGGAAATAGAAATTTGGCCTATGATTAGGGAATTATTCTCAAATCAGGAGCAAGAGAAGATTATAGGATGCATGCTTGGAAGAATAAAAGCAGAAATATTACAAGATATGATACCTTGGCTAATGGCATCTTTAACACAGGAAGAACAGCATGTTGCTATGTTCTTATGGTCCATGGCTACTAAAAACACAAGTTTTGATGAATGGTTAGGTGAATGGTGGGATGGCTACAGTATAGCTAAGGCAACAGAAGGATCAAATGACGCCCCTCTACCAACCATTGACCCACTGGAGGTGATATCCGAATACTTGTCTGAAGAAGTTCTGAATGAATTACAAGAATCCTCTCCCAACAAAAGCAAAAATTTGTTTCAGAAAGATCATACTGGTGATAATGTTGACCCATCTAACTACAATGTTGATGGCGAAGTTAAGGTTCATAATGCAGAACCAAATAATAAGGAATGTTCAAAATTCACAGACCAATTCCATGATAACAAAAAACATGCTGGCAGTAGAGTAACAGATATCACAAATTTGGTCAATAATGGTCAATCTTTTCAATTGTTTGACAAGTCTGAGCATTATGATCGACTACTTAAACTGAGTCAAGATGATTTGGAGATGGCAATAAGAAGGGTCTCTCGTGACTCTTGCTTAGATCCTCAGAAGAAGTCATACATAATACAGAACCTGCTAATGAGCCGTTGGATTATTAGTCAGCAGATCTCTTCTACAGAAGTCAATATGAAAAGCGATGGGCAGGAATTTCCTGGGAAGCATCCATCTTATAGGGACCCTCTCAAACTAATCTATGGTTGCAAGCACTACAAGAGGAACTGCAAGCTTTTTGCTCCATGCTGCAACCAACTTCATACCTGCATACATTGCCATAATGAGGTATCAGAACCAGATCATTCAATTGACAGGAAATATATTACAAAGATGATGTGCATGAAGTGCTTGGTGATCCAACCAATTGGTGCCACATGCTCAACCATTTCATGCTGTAACTTATCCATGGCAAAATATTACTGCAGGATCTGCAAATTATTTGAAGATGAAAGGGAAATTTACCATTGTCCTTATTGTAACCTGTGCCGAGTTGGAAAGGGGTTGGGTGTTGACTACTTTCACTGTATGAATTGCAATGCTTGTATGTCTCGTTCTCTTATGGTACATACATGCAGAGAGAAACATTTAGACGATAACTGTCCAATTTGTCATGAATATATCTTCACATCCTGTTCTCCTGTGAAAGCCCTCTCATGTGGACATGTCATGCACTCAACATGTTTTCAGGAGTATACATGCTTTAACTATACCTGCCCAATATGCAGCAAATCGCTTGGTGACATGCAGGTATATTTTAACATGTTAGATGCGTTATTGGCTGAAGAGGAAGTTCCTGAAGAACTTTCGGGTCGAACTCAGGAGCATCCCCCTTCCACTGGCTTTACCACAAATGTCGTTATTGTGGTTCCTACAACACCAGAGTTCTATGATTCTTCACCGTGA 3771 0.3911 MDGGDNSLSDKEEENDDVDFTEILSRVRLVDAPILLFVCFHKAMRSELRLLRRIAKTASLEDEHQRSRETIVKLRSRFQFLKLAQKYHCAAEDELIFRALDIHVKNVASTYSLEHSSTEDLFDSIFYFLDELMGTSQSFPKLFQELLYSIAVLQTSINQNMLKEEKQVFPLLMQKLSTKEQASLVWQFICSVPIMFLEEVLPWMVSFLSADKKTEVTQCLSEIAPMEKALQEVLVSWVVSNNQTFGEAYFEIEEVQCADGSLHKERSLRLSSCNKNCKEVSSWMKMNGLEIEDGVNQVNVLQLWHEAIKKDLKEILKELHLIRNSSCFQNLDAIVTQINFFADVLFFYSNAQKTFFHPLLNKPAYDWLPKSTEQFLGESHIEDLQQLLCNSESGMPLCNFVEELCRKLESFISGVKKQFAFQETEVFPVIKKNCRNGIQERLLSLSLQMMPLGLLRCVINWFSVHLSEKESMSILYYIKKGNHFVCEAFSSLLHEWFCIGYSGKTSIEKFRQDLQHMFKSRWSFLPEKIKERSEFSLLNSGQQPNKVSGKNCLSNSSSSGSNNSYKYETPYSIGINLHIFFPATVGKLHQSSRFHVGSSSSISFLGDPKPIDLIFFFHKAIRKDLDYLVLGSAQLEQNSELLMDFRKRFHLICFLHQIHTDAEDEVVFPALEARGKLKNISHAYTFDHKLDDEHFDKVSRILDKMSELHLPVSTIDSNVRENIMLRQHHLCRKLQQMCKSMHKLLSDHLNREEIEIWPMIRELFSNQEQEKIIGCMLGRIKAEILQDMIPWLMASLTQEEQHVAMFLWSMATKNTSFDEWLGEWWDGYSIAKATEGSNDAPLPTIDPLEVISEYLSEEVLNELQESSPNKSKNLFQKDHTGDNVDPSNYNVDGEVKVHNAEPNNKECSKFTDQFHDNKKHAGSRVTDITNLVNNGQSFQLFDKSEHYDRLLKLSQDDLEMAIRRVSRDSCLDPQKKSYIIQNLLMSRWIISQQISSTEVNMKSDGQEFPGKHPSYRDPLKLIYGCKHYKRNCKLFAPCCNQLHTCIHCHNEVSEPDHSIDRKYITKMMCMKCLVIQPIGATCSTISCCNLSMAKYYCRICKLFEDEREIYHCPYCNLCRVGKGLGVDYFHCMNCNACMSRSLMVHTCREKHLDDNCPICHEYIFTSCSPVKALSCGHVMHSTCFQEYTCFNYTCPICSKSLGDMQVYFNMLDALLAEEEVPEELSGRTQEHPPSTGFTTNVVIVVPTTPEFYDSSP 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1554 1256 MobiDBLite consensus disorder prediction 540 562 - -
Lal14g1554 1256 ProSiteProfiles Zinc finger CTCHY-type profile. 1092 1155 IPR017921 -
Lal14g1554 1256 Pfam Hemerythrin HHE cation binding domain 41 172 IPR012312 -
Lal14g1554 1256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1149 1200 IPR013083 -
Lal14g1554 1256 CDD Hr-like 40 170 - -
Lal14g1554 1256 MobiDBLite consensus disorder prediction 866 889 - -
Lal14g1554 1256 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 24 1230 - -
Lal14g1554 1256 SUPERFAMILY CHY zinc finger-like 1016 1083 IPR037274 GO:0008270
Lal14g1554 1256 Gene3D nmb1532 protein domain like 32 190 - -
Lal14g1554 1256 Gene3D nmb1532 protein domain like 294 444 - -
Lal14g1554 1256 Gene3D nmb1532 protein domain like 607 777 - -
Lal14g1554 1256 SUPERFAMILY Zinc hairpin stack 1093 1147 IPR037275 -
Lal14g1554 1256 ProSiteProfiles Zinc finger CHY-type profile. 1018 1089 IPR008913 GO:0008270
Lal14g1554 1256 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 24 1230 - -
Lal14g1554 1256 CDD Hr-like 612 758 - -
Lal14g1554 1256 ProSiteProfiles Zinc finger RING-type profile. 1156 1198 IPR001841 -
Lal14g1554 1256 SMART ring_2 1156 1197 IPR001841 -
Lal14g1554 1256 CDD RING-H2_Pirh2 1155 1198 - -
Lal14g1554 1256 SUPERFAMILY RING/U-box 1154 1209 - -
Lal14g1554 1256 Pfam CHY zinc finger 1025 1102 IPR008913 GO:0008270
Lal14g1554 1256 MobiDBLite consensus disorder prediction 866 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1554 Lal-Chr14 16205707 16215150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1554 295 841 C2H2 Transcription Factor Family AT3G18290 19.782 8.74e-13 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1554 14 16205707 16215150 Lal14g1554 14 16205707 16215150 ECH
Lal14g1554 14 16205707 16215150 Lal7g0950 7 15841718 15852962 LSH
Lal14g1554 14 16205707 16215150 Lal19g1507 19 17427566 17430784 LSH