Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1545 ATGTCTCTCGCTTTTACCGCCGCTGACTCCTCCATCTCCGGCGACCTCCCTGCCGGCGAGTTTATGCTGTTCGGGGTTAGGGTGGTGGTTGATTCCATGAGGAAGAGTGTTAGTATGAACAATCTCTCTCAGTATGAGATTCCTCGAGACGCCTCTTCCAACAATACCACCACCAATAACAAAGATGTTGTCGCTGCCGGTTATGCCTCCGCCGATGACGCCGTCCCTCTAAACTCCGCCAAGCTCCGCGAGCGCAAGCGAGATGATGATGATGATGCAGGGGTTCCGTGGACGGAGGAAGAGCACAAGCTGTTCTTGGTGGGATTGCAGAAAGTGGGGAAAGGTGATTGGAGAGGAATCTCCAAGAACTATGTCAAGACCCGGACCCCTACCCAGGTTGCTAGCCATGCTCAGAAATACTTTCTCCGCCGCACCAACCTCAATCGCCGTCGCCGTAGATCTAGCCTCTTTGATATCACCACTGACACAGTCCCAATGGAGGAAGAACAGATACAGAATCAAGATAATGTGTCTCATTTACAGTCTGTGTATCCTGCAGCCATTGAAACTAGCAACACCGATAGATTTCAAATGATGCCAATTTATCCGATGGGTGTTGGTTCTGGAATGTTTTCAGTCAAAGCTGAGAATCCAATGGAAGAACTCTCTTTGGGACAAGGAATCATGGAACACAATGTTCCAACTAACCAAGTTCTTCCAATTCCTAAAGCTTCCACAGTGTCTGATATTGCCTCCAATTCAAGCTCAACTATTGACCCACCAAAACTGTCACTTGGGCTATCTTTCTCATCTGATCAAAGGCAAACATCCTCAAGACATTCACCTTTGCATGCATTGCCTCATTTAAATAACGGAGATAGCATCATAAGCGTTGCCTGA 900 0.4789 MSLAFTAADSSISGDLPAGEFMLFGVRVVVDSMRKSVSMNNLSQYEIPRDASSNNTTTNNKDVVAAGYASADDAVPLNSAKLRERKRDDDDDAGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDTVPMEEEQIQNQDNVSHLQSVYPAAIETSNTDRFQMMPIYPMGVGSGMFSVKAENPMEELSLGQGIMEHNVPTNQVLPIPKASTVSDIASNSSSTIDPPKLSLGLSFSSDQRQTSSRHSPLHALPHLNNGDSIISVA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1545 299 ProSiteProfiles SANT domain profile. 92 145 IPR017884 -
Lal14g1545 299 MobiDBLite consensus disorder prediction 250 284 - -
Lal14g1545 299 CDD SANT 96 141 IPR001005 -
Lal14g1545 299 Gene3D - 95 147 - -
Lal14g1545 299 ProSiteProfiles Myb-like domain profile. 96 141 IPR001005 -
Lal14g1545 299 SUPERFAMILY Homeodomain-like 94 145 IPR009057 -
Lal14g1545 299 PANTHER KIN2 17 299 - -
Lal14g1545 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 145 IPR017930 -
Lal14g1545 299 MobiDBLite consensus disorder prediction 250 287 - -
Lal14g1545 299 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 17 299 - -
Lal14g1545 299 SMART sant 93 143 IPR001005 -
Lal14g1545 299 Pfam Myb-like DNA-binding domain 96 141 IPR001005 -
Lal14g1545 299 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 94 143 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1545 Lal-Chr14 16157945 16160207 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal14g1545 Myb_DNA-binding 3.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1545 - - aip:107632799 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1545 14 16157945 16160207 Lal14g1545 14 16157945 16160207 ECH
Lal14g1545 14 16157945 16160207 Lal7g0944 7 15789900 15796345 LSH
Lal14g1545 14 16157945 16160207 Lal19g1103 19 14673865 14676131 LSH