Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1542 ATGACTACCGCCGGCGATGTTTTCAGGCATACTCTGCCGGAATTGCTAGAAGAATCACCTTCCGGTGCAGGAGAGCTTCACGTTCTTGCTGTCGATGATAGCTTCGTTGATCGCAAGGTTATTGAACGTTTGCTTAAGGTCTCATCTTGCAAAGTAACTGTTGTAGAAAGTGGAACAAGAGCTCTTCAATACTTGGGGTTGGATGGAGACAAAACCTCATTTGGCTTTGATAGTGTGAAGGTTAATATGATAATCACCGATTATTCCATGCCTGGGATGACAGGATATGAACTACTCAAAAAGATCAAGGTTCTTATCTTTCACCCCCTTTGTCAATTTCAGCAGGAGTCATCTGTTTTTAGAGAGATTCCGGTGGTGATCATGTCTTCAGAGAATATCTTGACTCGAATTGATAGGTGCTTGGAGGAAGGAGCAGAGGAATTTCTGTTGAAGCCTGTCAAGTTGGCAGATGTAAGACGCTTAACAGATTTCATTATGAGGGGTGAAGTGAAGGAAGATGAGAAAACATCACAGAAAAGAAAGCTGTCTGATGATTGCAGTCCTACATTCCCATCAGTTTCTCAACCAAGAGATCCATCATCATCATCATCATCATCATCATCATCATCGGGACTTTCACCACTATCACCTTCCTCATTGTCCTCCAAGAAGTCAAGATTGTGA 684 0.4254 MTTAGDVFRHTLPELLEESPSGAGELHVLAVDDSFVDRKVIERLLKVSSCKVTVVESGTRALQYLGLDGDKTSFGFDSVKVNMIITDYSMPGMTGYELLKKIKVLIFHPLCQFQQESSVFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLADVRRLTDFIMRGEVKEDEKTSQKRKLSDDCSPTFPSVSQPRDPSSSSSSSSSSSGLSPLSPSSLSSKKSRL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1542 227 ProSiteProfiles Response regulatory domain profile. 27 166 IPR001789 GO:0000160
Lal14g1542 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 9 227 - -
Lal14g1542 227 Gene3D - 26 201 - -
Lal14g1542 227 MobiDBLite consensus disorder prediction 183 227 - -
Lal14g1542 227 MobiDBLite consensus disorder prediction 170 227 - -
Lal14g1542 227 CDD REC_typeA_ARR 28 161 - -
Lal14g1542 227 SMART REC_2 26 162 IPR001789 GO:0000160
Lal14g1542 227 Pfam Response regulator receiver domain 28 159 IPR001789 GO:0000160
Lal14g1542 227 SUPERFAMILY CheY-like 25 174 IPR011006 -
Lal14g1542 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 227 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1542 Lal-Chr14 16142565 16149456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1542 26 182 Response Regulator Gene Family AT3G48100 70.253 1.93e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal14g1542 Response_reg 1.5e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1542 K14492 - gmx:100527518 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1542 14 16142565 16149456 Lal17g0968 17 7847693 7851008 ECH
Lal14g1542 14 16142565 16149456 Lal14g1542 14 16142565 16149456 ECH
Lal14g1542 14 16142565 16149456 Lal19g1098 19 14635231 14638403 LSH