Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1527 ATGACTCATACCAGTTCCGATCAAAGCTACCGCCGCATTCTATCATACACGGCGGTGCATCCATGCGAACATATATCTCCAGCAACCCTTCTCGCTTCTCTCATCACTCTCTCACAAAACATATGCGACTTCCAACACAACTTCTTCCAAACCCAAAAGCGAAACGCAAGAGAAACATTACGGCAAGTTAACATCCTCTTCATTTTTCTCCACGAAATTCAAAATCATCGTCTTTTTCTCCCCGACTCCATAATCCTTTCCTTCTCAGAACTCCACTTCACGTTCCAAAAAATCCATTTTTTGATGCAAGATTGTACCCGTGATGGTGCACGACTCTTGCTGCTAGCGAAATCCAACCACATTGCTTCTCAATTCAGGTCACTTATTCGTGCTTCTTCCACTGCCCTTGATGTTTTACCTCTCAATAGAATCCAGGTGTGTGATGAAGTTAAAGAATTAGTAGAGTTAGTAGCAAAACAAGCGAGGAAAGCTAAGATGGAACTTGACCCCAACGATGAACGTGAAAGTAAAAAACTTGATTCAGTTTTGCGACAGTTTGAAAAGGGAATCGAACCCGACGTGAAAACCATGCAGGGAATCCTTAAATATCTCGAAATCAAAACATGGTCTGATTGTAACAAAGAGATCAAACTCTTGGAAGATGAAATTGAGTTTGATTGTGATGAGCGAGAGGTTCCATTATTAAGCAGCTTGATGGGGTTCATGAACTATTCCAGGGTAGTTATATTCGAAAAACTAGATTTTTTCAACACTGATCAATCATCATCAAGGTGCAGCACAGAGATGATGATAACATGTATAAATCTCCAAGATTTTCGATGTCCAATTTCCCTCGAACTTATGATGGATCCAGTAACTGTTTCAACCGGTCAAACCTATGATCGAGCCTCGATTAAAAAATGGCTCAAAGCAGGGAACATGATATGCCCCAAAACAGGGGAGAAGCTAACAAACACAGAATTAGTCCCAAACACAAGTCTCAAAAGACTTATCCAACAGTTCTGTATCGACAATGGTGCCTCTTTTTCTGGAAACCACGGCCGCGACATATCGAGGACTATTATGCCAGGTAGTTCAGCTGCAGCGCACGCCACACAGTTTCTTTCGTGGTTTCTTACTCATAGACTCGTGTTCGGGACTGAGGAGCAGAGGAACAAAGCTGCTTATGAAATTCGGGTGCTTGCAAGGTCTAATATTTTCAATAGGGCGTGCTTGATTGAAGTTGGAACTATCCCTCCTTTGCTTGATCTTTTGGGAAGTAATTGTAAATCAACACAAGAGAATGCAATATCTGCTTTGTTGAAGCTATCAAAGCACGCCATGGGACCGGGAAATATAATGGAAATTGGTGGTTTAGTACCAATTCTTATGGCTCTCAAGAAAGGGGTTACCTTGGAAATTCGTCAAATTGCAGCAGCTATAATATTTTATCTTTCTTCAGTAAAAGAGTATAGAAAAGAAATAGGAGAAAACCAAGAAGTGATTCCAGGTTTAGTAGAGTTGGTTAAGGAAGGAACAAGCTATGGGAAAAAGAATGCAGTGGTTGCAATTTTTGGGCTTCTTTTGCATCCTGGCAATCATGTCAGAGTGATTCAATCAGGTTCTGTTCCAGCACTAGTTACAATTTTGGCCTCCTCAGATAAACATGAACTTATAACTGAATGTTTAGCCGTTCTTGCTGTTCTTGCTGAGAAAGTGGATGGAGCAAATGCTATATTGAAAGCTACTAATTCATTGCAGTTAATCACTGGGTTGTTGCAATCTGTTACATCTAATGCAGGGAAAGAACATTGTGCTTCAATTTTGTTGTCCCTTTGTGTTAATGTTGGTGCTGATGTAGTTAGTGTTCTTTCTAAAGACACAACATTGATGCCTTTACTTTATTCACTTCTAACTGATGGTACTTCTCATGCTTCCAAAAAAGCACGGTTTCTTATCAAAGTTCTGCATGATTTCAATGAAACAAGAGCTTCTGGTGCATTGAAGGGTTCCTCAGTTCCACAGGAAAGAGCACCACAAATTTTGCTTTGA 2052 0.4045 MTHTSSDQSYRRILSYTAVHPCEHISPATLLASLITLSQNICDFQHNFFQTQKRNARETLRQVNILFIFLHEIQNHRLFLPDSIILSFSELHFTFQKIHFLMQDCTRDGARLLLLAKSNHIASQFRSLIRASSTALDVLPLNRIQVCDEVKELVELVAKQARKAKMELDPNDERESKKLDSVLRQFEKGIEPDVKTMQGILKYLEIKTWSDCNKEIKLLEDEIEFDCDEREVPLLSSLMGFMNYSRVVIFEKLDFFNTDQSSSRCSTEMMITCINLQDFRCPISLELMMDPVTVSTGQTYDRASIKKWLKAGNMICPKTGEKLTNTELVPNTSLKRLIQQFCIDNGASFSGNHGRDISRTIMPGSSAAAHATQFLSWFLTHRLVFGTEEQRNKAAYEIRVLARSNIFNRACLIEVGTIPPLLDLLGSNCKSTQENAISALLKLSKHAMGPGNIMEIGGLVPILMALKKGVTLEIRQIAAAIIFYLSSVKEYRKEIGENQEVIPGLVELVKEGTSYGKKNAVVAIFGLLLHPGNHVRVIQSGSVPALVTILASSDKHELITECLAVLAVLAEKVDGANAILKATNSLQLITGLLQSVTSNAGKEHCASILLSLCVNVGADVVSVLSKDTTLMPLLYSLLTDGTSHASKKARFLIKVLHDFNETRASGALKGSSVPQERAPQILL 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1527 683 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 277 348 IPR013083 -
Lal14g1527 683 ProSiteProfiles U-box domain profile. 274 348 IPR003613 GO:0004842|GO:0016567
Lal14g1527 683 PANTHER U BOX DOMAIN-CONTAINING 7 666 - -
Lal14g1527 683 SMART Ubox_2 278 341 IPR003613 GO:0004842|GO:0016567
Lal14g1527 683 SUPERFAMILY RING/U-box 278 349 - -
Lal14g1527 683 CDD RING-Ubox_PUB 279 321 IPR045210 -
Lal14g1527 683 Pfam Armadillo/beta-catenin-like repeat 408 444 IPR000225 GO:0005515
Lal14g1527 683 Pfam U-box domain 279 344 IPR003613 GO:0004842|GO:0016567
Lal14g1527 683 Gene3D - 364 668 IPR011989 -
Lal14g1527 683 SMART arm_5 530 571 IPR000225 GO:0005515
Lal14g1527 683 SMART arm_5 404 445 IPR000225 GO:0005515
Lal14g1527 683 SUPERFAMILY ARM repeat 386 656 IPR016024 -
Lal14g1527 683 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 541 584 IPR000225 GO:0005515
Lal14g1527 683 PANTHER OS07G0532750 PROTEIN 7 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1527 Lal-Chr14 16055266 16057317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1527 1 669 U-box Gene Family AT1G10560 40.087 1.23e-159 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1527 - - mtr:MTR_4g107010 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1527 14 16055266 16057317 Lal14g1527 14 16055266 16057317 ECH