Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1502 ATGGATAACTACTACCACCACCACTTTGACAACAATGATGCACTCTTACCACCTGGTTTTCGTTTCCATCCCACTGATGAGGAGCTTATCACATACTACCTCCTCAAGAAGGTACTAGACAATACCTTCACTGGTCGAGCCATAGCGGAAGTTGACCTCAACAAGTGTGAGCCATGGCAGCTCCCAGGGAAAGCGAAGATGGGTGAGAAGGAATGGTACTTCTTTAGCTTACGTGACAGGAAGTACCCAACTGGGTTACGTACTAATAGGGCCACAGAAACCGGTTATTGGAAAGCTACTGGGAAAGATAGGGAAATCTATAGCTCCAAGACTTGTGCACTTGTTGGTATGAAGAAAACTTTGGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGAAAAGAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCTTTACCTCTCTAGGACCTCCAAGGATGAATGGGTGGTATCACGTGTGTTCGAGAAGAATAACACTGGTGGTGGCTCCACCGTGTCTGCCACCGCCACTAGCAATTCCAAGAAGACTAGAGTTAGCACCTCATCTGCCAGCATGAGCCTAGGCCCTGAACCCGGTTCACCTTCTTCCATTTACCTTCCACCACTGCTGGACTCTTCTCCATACACCACCAGCAGCACCGCCGCATTCAACGACTGCGACGGCTGCTCCTATGACAGCACCGCCGCTGCCCAAATAGAGCACGTGTCCTGTTTCTCCACAATCTCAGCCAACAACTTCAACAATGCAACCTTTGACCTTGTTCCTCCGCAGCCGCAGACTCCTCTGGATCATGATCCTTTCACTCGGTTCCAATGCAATGTTGGTGTCTCAGCCTTCCCGAGCCTGAGGTCACTCCAAGATAACCTCCAGATGCCGTTCTTTTTCGCCCCCGCCCCAGTCCACATCGACGGTTCCAGTGACATGGCTGCCGTCGGGAAATGGCCGATGTCCGAGGAGCCAAAGTCTGTGGTGGCTGATGGTGGTTCCAGCATGGGGCTGGGGCATTCCGAGCTTGATTGCATTTGGAGCTATTGA 1071 0.5079 MDNYYHHHFDNNDALLPPGFRFHPTDEELITYYLLKKVLDNTFTGRAIAEVDLNKCEPWQLPGKAKMGEKEWYFFSLRDRKYPTGLRTNRATETGYWKATGKDREIYSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFAYLYLSRTSKDEWVVSRVFEKNNTGGGSTVSATATSNSKKTRVSTSSASMSLGPEPGSPSSIYLPPLLDSSPYTTSSTAAFNDCDGCSYDSTAAAQIEHVSCFSTISANNFNNATFDLVPPQPQTPLDHDPFTRFQCNVGVSAFPSLRSLQDNLQMPFFFAPAPVHIDGSSDMAAVGKWPMSEEPKSVVADGGSSMGLGHSELDCIWSY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1502 356 MobiDBLite consensus disorder prediction 172 205 - -
Lal14g1502 356 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Lal14g1502 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 7 353 - -
Lal14g1502 356 SUPERFAMILY NAC domain 11 168 IPR036093 GO:0003677|GO:0006355
Lal14g1502 356 MobiDBLite consensus disorder prediction 172 203 - -
Lal14g1502 356 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
Lal14g1502 356 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lal14g1502 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1502 Lal-Chr14 15911920 15914024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1502 4 356 NAC Transcription Factor Family AT5G53950 52.785 1.95e-122 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal14g1502 NAM 4.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1502 - - gmx:100788671 489.96