Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1479 ATGATGGATGGGAGAAGACATTCAGTTGATATTCCTATTTCTAAAACTCTTGTAGCATTGAGGAGGGTCAGATCATTGAGGGATCCTTCAGCTAATTGTATTAGCAAACTTTCTCCTTTGATTGATAATGTACATTGGGAAAATGGTTCGGGTAATGGGATTTCGCTGCGGTTCCTTGAGGCTCCTTATGCACGTGGTTCTGATGATGATGGCATTTTAAGAACCAAGAATCCAGATTTTAATGGGCAAAGAGAGCAGGATACTACTGATTTTGAATTGAATTGTGGCCTTTTGAAATCCAAGCTTAACTATTATGGGGTCTCAGGTAAGGAAGGGCAGCGAGTTGATGAACTACGGTACTCTAATCCTAATCCGGATGGCATTTCAGGAAATAAATCACCAAGTGAAAGCTGTTGTAGCAACCATGGGGGTAGAGGATTGGATTTGGCTTGCGTCATGCCTCCTATTAATCACTTGAGGAATGAGAAATCATGCTATTCATCAACTGCATTATCATCACAATTAGGGAGAATAGAATACTCAAAGTCGAACGGAAAGTCACTACGCAAGAATCAAGTGAAACGATCTAAAATGATGGGTGATATTGCAAGCCAATCAGGTAGTCCATGCCTTCCTGTTGGTGATGCTCTCTCGACGCATAGCACTTCACCATATATAACTGAAGATGTAGATGTTTTAGATAATCATGATGGATGTGGAATAAGCTGTTGTTGGTCAAAATCACCAAGAGAATCAAATAATTATTCTGAAAAAGAAGACCTTCCCCTGATGTTGCAGCATGATAATGAGAAATATCATTATGAACATAGAAGCATGAGACACATGGGTGGTGGAACTAGTCCAAATTTGGAAACTCCTAGAAGTTTATGTATGAAATTCAAGCCAAAATCTTTCACTGACTTGGTTGGACAAAATGTGGTAGGAAGATCTCTTTTGGGTGCCATTTCTAGAGGAAGGATAACATCGTTTTATCTCTTCCATGGTCCTCGTGGTACAGGCAAGACATCTGCTTCTAGGATCTTTGCTGCTGCATTGAATTGTCTCTCCCCTGAGGAGCAAAAGCCATGTGGTCTATGTAGAGAATGTGTTTTATTATTTTCTGGAAGAAGTAAAGATGTTAAGGAAGTGGATTCTTTAGGACTCAATCGTGTAGACAAAGCTAAATCCCTTGTTAAGAGTGCATGCATACCTCCCGTTTCCTCGCGTTTTAAGGTGTTCATTATTGATGAGTGCCAGTTTTTGCAAGGGGAAACATGGGTGATTATTTTGAATAGCCTAGAGAAATTTCCCCAGCATGTGGTTTTTGTGATGATCACTCCCGAATTGGATAACCTTCCTCGAAGTGCAGTCTCACGGGCTCAGAGGTATCACTTTCCGAAGATTAACGATGCTGACATTGCAAGAAGATTGGAAAAAATTTGTGTTGAAGAAAGCCTTGATTTCGAACAAGTGGCCTTGGACTTCATTGCTGCTAAATCATTTGGTTCTCTTAGGGATGCAGAAATGATGCTTGATCAGCTGAGTTTGCTTGGCAAAAAAATCACGATTTCCTTAGCTTATGAGCTTACTGGTGTTGTTTCTGATGAAGAATTGCTTGAATTGTTGGACCTGGCTTTGTCATCTGACACTTCAAATACAGTTAGAAAAGCCCGGGAACTTATGAGATCACGGATAGATCCTCTACAACTTATGTCACAGCTGGCAAATCTTATTATGGACATTCTTGCAGGAAAATATGAAGTTGGTGGTTCTGAAATCAGCAGAAGATTTTCGACTAGACATACCTCGGAAGCAGACCTGCAGAAACTAAATCATGCAGTAAGAATACTTTCTGAGACAGAGAAGCAGTTGAGAATTTCTAAGAATCAAACAACATGGTTCACTGCAGCTCTTTTACAACTAAGCTCTGTGGATTGTTCTTCTGTGAATGCAAGCGATACCAAGTTATGTTTGAGAGCTGCATCCATTCAAGATGGGGATTTATGTAATACATCATCTACCGGGGAGAGCCTGAAGCATGTTTCTATGGGTCAATGTGATGACAAGTCATATAGATTTGGAGTGCAGGAGGGTGACAGAGGAACACCGGATTCCATATGGTATAGTGCTACACAGATATGTCGATCTAGCCGGCTCAAGAAATTTCTCAGGAAGCAAGGGAAGTTGTCTTCACTTTGGGTTAACGAAGGCCATGCAGTTGCCGAGTTGGAATTCGGTCATCATGACTTTGTTGCTAGGGCTGAGAAGTCATGGAAATTAATTGCAAGTTCACTGCAGTTCATATTGGGTTGTAACATTGAGCTCAGGATCAATTATGTACCATGTACTTCAGATTCAAAGTTTGCAAAATTTAAGAGGTCATCTTTCAATTTCTTCAATTGTTCCCGCAGAATTCTACGAAAGTCATTATCATCGCATGAACAGGAAAGTGAATCTGATTATGCTGACTGTACCTCTGAAAAGCCTATGATGAAGGATCAGACCTTAACTTGTTCATCCGATTGTGGACCTCGGGTGCCACCACCTGAGTCCTATGGTGGAACTGAGTTTTTAACAACTTTAAGAAGTTCTGAAGGGAATTTGCTGTGCTCAGGGAATAGACTTTTGAATAGTTCAGCTCCAGTGGCTCCAAGGATTTCATGTGCAAGAGATGATTCTCTCAAGGAAGACGGAGGCAACTATGCGCATCAAGTTTCATCAACCGTAGATTTCAATAGTCACTCTAACTGTTTTCCTCAAACTCGCTGGCTTCATAGGAAGTCCTGTTCTTCTCATGCATCATAG 2805 0.4086 MMDGRRHSVDIPISKTLVALRRVRSLRDPSANCISKLSPLIDNVHWENGSGNGISLRFLEAPYARGSDDDGILRTKNPDFNGQREQDTTDFELNCGLLKSKLNYYGVSGKEGQRVDELRYSNPNPDGISGNKSPSESCCSNHGGRGLDLACVMPPINHLRNEKSCYSSTALSSQLGRIEYSKSNGKSLRKNQVKRSKMMGDIASQSGSPCLPVGDALSTHSTSPYITEDVDVLDNHDGCGISCCWSKSPRESNNYSEKEDLPLMLQHDNEKYHYEHRSMRHMGGGTSPNLETPRSLCMKFKPKSFTDLVGQNVVGRSLLGAISRGRITSFYLFHGPRGTGKTSASRIFAAALNCLSPEEQKPCGLCRECVLLFSGRSKDVKEVDSLGLNRVDKAKSLVKSACIPPVSSRFKVFIIDECQFLQGETWVIILNSLEKFPQHVVFVMITPELDNLPRSAVSRAQRYHFPKINDADIARRLEKICVEESLDFEQVALDFIAAKSFGSLRDAEMMLDQLSLLGKKITISLAYELTGVVSDEELLELLDLALSSDTSNTVRKARELMRSRIDPLQLMSQLANLIMDILAGKYEVGGSEISRRFSTRHTSEADLQKLNHAVRILSETEKQLRISKNQTTWFTAALLQLSSVDCSSVNASDTKLCLRAASIQDGDLCNTSSTGESLKHVSMGQCDDKSYRFGVQEGDRGTPDSIWYSATQICRSSRLKKFLRKQGKLSSLWVNEGHAVAELEFGHHDFVARAEKSWKLIASSLQFILGCNIELRINYVPCTSDSKFAKFKRSSFNFFNCSRRILRKSLSSHEQESESDYADCTSEKPMMKDQTLTCSSDCGPRVPPPESYGGTEFLTTLRSSEGNLLCSGNRLLNSSAPVAPRISCARDDSLKEDGGNYAHQVSSTVDFNSHSNCFPQTRWLHRKSCSSHAS 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1479 934 CDD AAA 309 459 - -
Lal14g1479 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 517 IPR027417 -
Lal14g1479 934 SMART AAA_5 327 487 IPR003593 -
Lal14g1479 934 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 109 914 - -
Lal14g1479 934 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 295 641 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lal14g1479 934 Pfam DNA polymerase III, delta subunit 313 468 - -
Lal14g1479 934 Gene3D - 289 466 IPR027417 -
Lal14g1479 934 Gene3D - 532 645 - -
Lal14g1479 934 Gene3D - 469 531 - -
Lal14g1479 934 CDD HLD_clamp_pol_III_gamma_tau 468 531 IPR045085 -
Lal14g1479 934 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 109 914 - -
Lal14g1479 934 SUPERFAMILY post-AAA+ oligomerization domain-like 538 639 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1479 Lal-Chr14 15792300 15797456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1479 287 580 Core DNA Replication Machinery Family AT1G21690 23.154 4.51e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1479 - - lang:109357850 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1479 14 15792300 15797456 Lal14g1479 14 15792300 15797456 ECH