Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1425 ATGAGAGATTTGAGAGAGAAAGAAGAACAAATGGCGTCATCTTCAGATATAGCAATGAACAGAAGAGGAGAAATCATTAACAACAACAACAACGGTGGTGGAAGGGAAGGTCCAAACGAAGCAGAGCTAGCACTTTTCAGAGAGCTATGGGATGCGTGTGCAGGTCCACTTGTAACCGTGCCAAGAGAAGGAGAGCGTGTGTTTTACTTCCCTCAGGGCCATATTGAACAGGTTGAGGCCTCAACAAATCAGGTAGCAGACGAGCACATGCCTGTGTATGATCTACGCTCCAAGATTCTATGTCGGGTCATGAACATTGTGCTCAAGGCAGAGCTGGACACCGACGAGGTGTTTGCTCAGATTACCTTAGTTCCGGAGCCAATTCAAGATGAAAATAAAGTTGAGAAAGAGCCGCCACCAGCGCCGCTGCCAAGGATTCATGTGCATTCATTCTGTAAAACCTTGACTGCCTCTGATACCAGTACTCATGGAGGGTTTTCGGTGTTGAGACGACATGCTGATGAATGCCTTCCTCCTCTGGACATGACAAAGCAGCCACCTACTCAGGAATTGGTGACCAAGGACTTGCATGGGAACGAGTGGCGATTCAAGCATATCTTTCGTGGTCAACCATGCAGGCACTTGTTGCAAAGTGGTTGGAGTGTTTTTGTCAGCTCAAAGAGGTTGGTTGCTGGGGATGCATTTATATTTCTAAGAGGTGAGAATGGGGAACTTAGAGTTGGAGTCAGGCGTGCAATGAGGCAGCAGGGTAATGTTCCATCGTCGGTTATCTCTAGCCACAGCATGCACCTCGGTGTCCTTGCAACTGCTTGGCATGCTGTCTCCACTGGGACAATGTTCACTGTTTATTACAAGCCTAGGACTAGTCCATCTGAGTTTATTGTTCCATATGATCAATACATGGAGTCTCTCAAAGTTAATTACACTATAGGAATGCGGTTCAAAATGAGGTTTGAAGGTAAAGAGGCTCCAGAGCAAAGGTTTACTGGGACCATTGTTGGAATTGAAGATGCTGACCCTAAAAAGTGGCCTGACTCCAAATGGAGAAGTCTCAAGGTGAGATGGGATGAAACATCTAACATACCTCGTCCTGATAGAGTTTCCCCTTGGAAAATAGAGCCTGCTCTTGCTCCTCCAGCTATAAATCCTCTTTCAATGCCCAGACCTAAAAGGCATCGGTCTAATGTGGTTCCATCATCCCCAGATTCACCTGTTCTTACTCGAGAAGGAGCATCATCTAAAGTAAGCACAAACCCTTTGCCAGCAAGTAGATATCCAAGGGTCTTGCAAGGTCCAGAATTCTCTTCCTTGAGAGGCAATTTGGTAGAACGCAACGAGTCTGATAATGGTGAGAAGTCTGTTGTGTGGCCACCTGCAGTAGACGATGAAAAGATTGATGTTGTTTCTACTGCAAGAAGGTTTGGACCAGAGAGCTGGATGTCAACAAGGAGGCATGAAACATACTCAGGTCTACTATCAAGCATTGGGGCCAGTAGAGATCTTTCTTCACATCTATCCTTACTTGATCAAATTGGTGCTGTAGCTAATCCTGCTAAGAAACATTTTTTGGATCGTGAAGGCAAACTTAATGTGATGGGTAGTCCATGGTCAGCAGTGCCGTCTAGTTTATCACCGAACCTTGTGAACTCCAATACAAAAGGTCCTGCACATGGTGGTGATTTAGCTTATCAAGCTCGAGGGAATTTGAGGTACAGTGCATTTGGTGAATACCCTGTAAATGGAGGTCATAAAGTTGAGCATCCACATGGAAACCTGATGATGCTACCACCAACCACAACTCAATATGTAAGTCTCCGTTCAAGAGAAATGTTGTCAAAACAAATATCAGCCAATACTGGTGAAGTTGTGAACCCAAAAGAAGGAAACTGTAAGCTATTTGGCTTCTCACTTCTCAATAGCCCCGTAGCATCAGGTCCTTCCATGTTGCAAAGAAATGTTGTAAATGAGCTAGTTGGTCCCATGAATCTTCCATCACACCAACATCATACTTTCGAAAATGATCAGAAGTCTGAGCATTCAAGGGGCTCTAAACCTGCAGATGGTGTAGTTGTTGCTGATGACCACGAGAAGCATGTGAAAGATGTTCAACCCAAACTGCACAACAGTTCTGCTAGAAGCTGCACTAAAGTTCACAAGAAGGGGATTGTGCTTGGTAGGTCTGTGGACCTTACAAAGTTCAGTGGCTATGATGAATTAATTGCTGAATTGGACCAGCTTTTTGAATTTGGAGGCGAATTAACTTCGCCAAAAAAGGACTGGCTTATTGTCTACACTGATAATGAGGGCGACATGATGCTTGCTGGCGATGATCCATGGCCGGAGTTTTGCGCCATGGTCTGTAAAATGTATATCTACCCAAAAGAGGAGATTCAAAAAATGAACCCGGGTACCATAAGTTCAAAAATTGAAGAGAACCTGTCAGGTAGTCAAGGTGCAGAGCATCCAGCTTCTGACACCTGA 2502 0.4488 MRDLREKEEQMASSSDIAMNRRGEIINNNNNGGGREGPNEAELALFRELWDACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADEHMPVYDLRSKILCRVMNIVLKAELDTDEVFAQITLVPEPIQDENKVEKEPPPAPLPRIHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTKQPPTQELVTKDLHGNEWRFKHIFRGQPCRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESLKVNYTIGMRFKMRFEGKEAPEQRFTGTIVGIEDADPKKWPDSKWRSLKVRWDETSNIPRPDRVSPWKIEPALAPPAINPLSMPRPKRHRSNVVPSSPDSPVLTREGASSKVSTNPLPASRYPRVLQGPEFSSLRGNLVERNESDNGEKSVVWPPAVDDEKIDVVSTARRFGPESWMSTRRHETYSGLLSSIGASRDLSSHLSLLDQIGAVANPAKKHFLDREGKLNVMGSPWSAVPSSLSPNLVNSNTKGPAHGGDLAYQARGNLRYSAFGEYPVNGGHKVEHPHGNLMMLPPTTTQYVSLRSREMLSKQISANTGEVVNPKEGNCKLFGFSLLNSPVASGPSMLQRNVVNELVGPMNLPSHQHHTFENDQKSEHSRGSKPADGVVVADDHEKHVKDVQPKLHNSSARSCTKVHKKGIVLGRSVDLTKFSGYDELIAELDQLFEFGGELTSPKKDWLIVYTDNEGDMMLAGDDPWPEFCAMVCKMYIYPKEEIQKMNPGTISSKIEENLSGSQGAEHPASDT 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1425 833 Pfam B3 DNA binding domain 151 252 IPR003340 GO:0003677
Lal14g1425 833 SUPERFAMILY DNA-binding pseudobarrel domain 148 280 IPR015300 -
Lal14g1425 833 MobiDBLite consensus disorder prediction 403 427 - -
Lal14g1425 833 ProSiteProfiles B3 DNA-binding domain profile. 151 253 IPR003340 GO:0003677
Lal14g1425 833 SUPERFAMILY CAD & PB1 domains 720 796 - -
Lal14g1425 833 MobiDBLite consensus disorder prediction 1 37 - -
Lal14g1425 833 PANTHER AUXIN RESPONSE FACTOR 2 34 823 - -
Lal14g1425 833 MobiDBLite consensus disorder prediction 668 694 - -
Lal14g1425 833 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 34 823 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal14g1425 833 MobiDBLite consensus disorder prediction 13 35 - -
Lal14g1425 833 Gene3D - 715 808 - -
Lal14g1425 833 MobiDBLite consensus disorder prediction 676 694 - -
Lal14g1425 833 CDD B3_DNA 149 251 IPR003340 GO:0003677
Lal14g1425 833 SMART B3_2 151 253 IPR003340 GO:0003677
Lal14g1425 833 Pfam Auxin response factor 277 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal14g1425 833 Gene3D - 148 253 IPR015300 -
Lal14g1425 833 Gene3D - 314 384 - -
Lal14g1425 833 ProSiteProfiles PB1 domain profile. 719 801 IPR000270 GO:0005515
Lal14g1425 833 MobiDBLite consensus disorder prediction 385 434 - -
Lal14g1425 833 Pfam AUX/IAA family 765 801 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1425 Lal-Chr14 15492135 15497534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1425 27 827 B3 DNA Binding Superfamily AT5G62000 62.515 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lal14g1425 B3 2.9e-21 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1425 14 15492135 15497534 Lal14g1425 14 15492135 15497534 ECH
Lal14g1425 14 15492135 15497534 Lal7g0855 7 15115099 15119902 LSH
Lal14g1425 14 15492135 15497534 Lal19g1003 19 13905353 13910154 LSH
Lal14g1425 14 15492135 15497534 Lal17g0818 17 6018799 6023878 PCT
Lal14g1425 14 15492135 15497534 Lal4g0686 4 5384525 5389705 PCT