Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1405 ATGGCTTTTGGTGCTATAGTTCGTAGGAAATTCACAACACATTTGAAGCTCCAATCTTTGTGTTTTACTAATCAATTATTCTCTCTCAATTCTCAAACCCAACAACATGTTTTTTCCTTTCACACCCAATCCACTGGTTCTGGTGCTGATGGATTACCATCTTATATGCGTGGAGCTGTGTTTAGGGAACCCAATAAGCCTCTCACCATCGAAGAATTTCACATGCCTCGCCCCAAAGCTGGTGAAGTCCTCATCAAAACCAAAGCTTGTGGAGTTTGCCACTCTGATCTACATGTTATGAAAGGTGAAATTCCCTTTTCCAGTCCTTGTGTTGTGGGGCATGAGATAACTGGTGAAATTGTTGAACATGGACCCCTCTCAGACCCCAAAACTGTAGAAAGGCTTCCACTTGGGTCTCGGGCTGTCGGGGCCTTTATCATGCCTTGTGGCAACTGCTCTTACTGTTCAAAGGGGCACGATGATCTATGTGAACCTTTCTTTGCTTATAACAGGGCAAAAGGAACCCTCTATGACGGTGAAACTCGACTATTTCTTCGAAGCAATGGAAAACCAGTGTTTATGTATAGTATGGGAGGGCTTGCCGAGTATTGTGTTGTGCCAGCAAATGCAGTGTCAGTATTACCAAAATCATTGCCATATAATGAGTCTGCAATTCTTGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCTGAGGTACGTCCTGGTGATTCTGTTGCTGTTATTGGAACCGGTGGTGTTGGCTCCAGTTGTTTGCAGATAGCTAGAGCATTTGGCGCTTCAGATATAATTGCCGTGGATGTTCAGGATGAAAAGCTACTAAAAGCAAAGATATTTGGTGCTACTCACACTATTAATGCAGCAAAGGAAGATCCCATTGCAAAGATATTGGAAATTACTGGTGGAAAGGGTGTTGATGTCGCTGTGGAAGCGCTGGGGAAACCACAGACATTTTCACAGTGCACACATAGTGTGAAGGATGGAGGAAAGGCTGTGATGATTGGATTGGCACAAGCTGGTTCAGTAGGAGAGATAGATATAAATCGGCTAGTTCGTAGAAAGATACAAATTATTGGTTCATATGGAGGCAGGGCAAGACAGGATCTTCCAAAGTTAACTAGATTGGCAGAAACAGGTATCTTCAATCTTAGTGATGCTGTTTCTAGAACATACACCTTTGAGGAGGCAGACAAAGCATTCCGAGATCTCAATGAAGGAAAAATTGTCGGTCGAGCTGTGATCGAAATAATGTAG 1284 0.4338 MAFGAIVRRKFTTHLKLQSLCFTNQLFSLNSQTQQHVFSFHTQSTGSGADGLPSYMRGAVFREPNKPLTIEEFHMPRPKAGEVLIKTKACGVCHSDLHVMKGEIPFSSPCVVGHEITGEIVEHGPLSDPKTVERLPLGSRAVGAFIMPCGNCSYCSKGHDDLCEPFFAYNRAKGTLYDGETRLFLRSNGKPVFMYSMGGLAEYCVVPANAVSVLPKSLPYNESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLLKAKIFGATHTINAAKEDPIAKILEITGGKGVDVAVEALGKPQTFSQCTHSVKDGGKAVMIGLAQAGSVGEIDINRLVRRKIQIIGSYGGRARQDLPKLTRLAETGIFNLSDAVSRTYTFEEADKAFRDLNEGKIVGRAVIEIM 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1405 427 CDD Zn_ADH10 56 425 - -
Lal14g1405 427 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 56 426 - -
Lal14g1405 427 Gene3D - 60 416 - -
Lal14g1405 427 Pfam Zinc-binding dehydrogenase 256 386 IPR013149 -
Lal14g1405 427 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 113 127 IPR002328 GO:0008270|GO:0016491
Lal14g1405 427 Gene3D - 233 370 - -
Lal14g1405 427 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 56 426 - -
Lal14g1405 427 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 218 391 IPR036291 -
Lal14g1405 427 Pfam Alcohol dehydrogenase GroES-like domain 81 211 IPR013154 -
Lal14g1405 427 SUPERFAMILY GroES-like 52 259 IPR011032 -
Lal14g1405 427 SMART PKS_ER_names_mod 63 424 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1405 Lal-Chr14 15342479 15348685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1405 70 426 Monolignol Biosynthesis Gene Families AT4G37990 24.518 9.75e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1405 - - aprc:113855348 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1405 14 15342479 15348685 Lal14g1405 14 15342479 15348685 ECH