Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1395 ATGAAGGAAATGGATCCGATGGCCAAAGAAAATGTGTCAGCAACGGCAAAGGAAGAAGTTATCGATGATGGTTCCTCAAGTGCTGAGGCTGGGGATTTAGAATCTTGTTCTCGATTTAGTCTTGAGAAAGACTCGGGCTTGCCATGTTGTCGTGTCTGCCAATGTGCTGAGTCTGATAAAAGGGGAGATGCAGTGCTAGAATATTTGGGCATCGCTCCGGTCATAGAAGCGATTAAAAGCAGTGATGAAGTAAGCTCTGATGGTGATGAAATTAGAAAGCACCCCCCTCTTAACAGAAATGCTGATAACAATTCTGGGGTGGTGGAATTTGTTAGCCCTAATGGCGAGGTTTTCATTTGTAAAAGTGATTTGGAAATTGGTTTGCCTACTCAAGATACATTAATCGAACTTGGTTGTTGTTGTAAAAATGACCTTGCTTTAGTACACTATGCTTGTGCACTCAAGTGGTTTATCAACCATGGTTCTACCATTTGTGAAATATGTGGACATATACCAAAAAATATCAGAATTTCTGACTTCAATAAGATTATTAGTTCGTTGAAAGAATATGAAGCATTGAGGGAACGAGCTGCCAATGGCCATGCTGGTCCTGCACAAGTTCATTCAAATAATGCTGTGGATCCTGATGCTGTGGCTGCTATACGGAGGCAGCGGCTAAGTGAGATTGCCCTATGGTTTTGCCCTCATAATAGCAGTAACAATAACAATATTAGCAGCATGGAAACATTTTCGCAGGTTATTTCTGAGCAGCCTTTGAATATCGTTACTGAAGATGCTGGCCCTGCACCAAATCCTGCAACTAAATGGGCTGTGGAAGGTACAGGGATCCTGCTTGCTACTGGGCTGCTTACCATCACTCTCGCATGGCTTATAGCTCCTCGTGTTGGAAAGAAAACTGCAAAAGGTGGCCTTCACATTCTACTCGGAGGCATTTGTGCTTTAGCAGTGGTGATTTTCTTACGCTTTTTTGTGCTGACCAGAATCAGGTATGGACCTGCACGTTATTGGGCAATCTTGTTTGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCTCGGACTCATGGTACCACCCATGCAACATGA 1107 0.4309 MKEMDPMAKENVSATAKEEVIDDGSSSAEAGDLESCSRFSLEKDSGLPCCRVCQCAESDKRGDAVLEYLGIAPVIEAIKSSDEVSSDGDEIRKHPPLNRNADNNSGVVEFVSPNGEVFICKSDLEIGLPTQDTLIELGCCCKNDLALVHYACALKWFINHGSTICEICGHIPKNIRISDFNKIISSLKEYEALRERAANGHAGPAQVHSNNAVDPDAVAAIRRQRLSEIALWFCPHNSSNNNNISSMETFSQVISEQPLNIVTEDAGPAPNPATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTAKGGLHILLGGICALAVVIFLRFFVLTRIRYGPARYWAILFVFWFLVFGIWASRTHGTTHAT 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1395 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 171 IPR013083 -
Lal14g1395 368 MobiDBLite consensus disorder prediction 1 31 - -
Lal14g1395 368 SUPERFAMILY RING/U-box 132 170 - -
Lal14g1395 368 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 23 366 - -
Lal14g1395 368 PANTHER ZINC FINGER, RING-CH-TYPE 23 366 - -
Lal14g1395 368 SMART ringv_2 119 169 IPR011016 GO:0008270
Lal14g1395 368 ProSiteProfiles Zinc finger RING-CH-type profile. 109 175 IPR011016 GO:0008270
Lal14g1395 368 Pfam RING-variant domain 134 168 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1395 Lal-Chr14 15248947 15255105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1395 7 357 C3H Transcription Factor Family AT5G08750 61.111 5.28e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1395 - - lang:109358685 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1395 14 15248947 15255105 Lal14g1395 14 15248947 15255105 ECH
Lal14g1395 14 15248947 15255105 Lal19g0966 19 13603504 13609009 LSH