Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1380 ATGAAGATACAAGAGTGTGAGGTTGAGGCCATTGGCATCAACTATAAGATCCATAAACAGAAAACAAAGCACCCTTTTAAAGTCTTCAGCAAACCTCCAACACCAGATACCAAAGAAGATGGCCAAGAACAAGAGGAGGAAGCAAAATATGAGCAAAGTTGCAGTGGAGTTAAGCATGTTCTCAAGAATGTGAGTTGCAGAGCCAAGGCATGGGAAATCCTAGCAATTGTTGGGCCAAGTGGTGCTGGAAAGTCATCACTGCTTGAGGTTCTAGCTGGTAAAGTTAGTCCACAGAATGGTACTGTCTTGGTGAACCAGAAGCCTGTGGACAAAGCTCAGTTAAAGAAGCTTTCAGGGTATGTTACACAAAAGGATACTTTGTTTCCTTTACTTACAGTAGAAGAAACCATGATGTTTAGTGCAATGCTAAAGCTAAAGCTTCCACAAGAACAATTATGCTCAAGGGTCAAGTCACTGATTAAGGAGCTTGGACTTGACCATGTTGCTGGGACTAGAATTGGTGATGACAGGGTCAGAGGGATATCCGGTGGTGAGAGGCGCAGAGTGTCTATCGGTGTTGAAATCATACATGACCCAAGAGTGGTGATTCTGGATGAACCAACTTCAGGGCTAGACAGTAACTCAGCTTTGCAGATAGTTGATATGCTTAAGGTCATGGCTGACACTAAGGGGAGAACTATAATCCTTAGTATCCATCAACCTGGGTTCAGAATAGTGAAGTTGTTCAATTCATTGCTATTGTTAGCTAATGGCTGTCTGTTTCACCATGGCACTGCAGATTTGCTGGATGTGAATCTAAGGCTAATGGGTTTAAATATTCCTCTTCATGTTAATGTTATTGAATTTGCCATTGAGTCCATTGACGCCATTCAGCAACAAAGGTGTCAGCTAGAAACTCCACAAGAGGCAATGCAACAGAAGAAAGGTGACCATGCAGAAGAAACAGGTGAGTGTAGAAGTGGTAAGTTTACTCTACAACAGCTCTTTCATCTGTCCAAGGTGATTGATGAAGAAATCATCAATGCTGGGATCGATTTCCCTTGTGATTTTGCTAATTCTAGATTAAGAGAAACAATGATTCTCACTCAAAGGTTCTCCAAAAACATTTTTCGTACAAAAGAGCTCTTTGCATGTAGAACAATTCAGATGCTAGTTTCTGGGCTGGTTTTGGGGTCCATCTTTTGTAACCTCAAGGATGATCTAGTGGGAGCAGGAGAAATAGTTGGTCTATTTGCTTTCATATTAACATTTTTGTTATCAACCAGCATAGAAGCTCTACCAATCTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACATCTTCTGGAAGCTACCGTGTATCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTGCTCATCCTAGCCATTTTGTTCTCATCGCCCTTATACTGGCTAGTTGGTCTGAACAAGAATTTCATGGCGTTTTTGCACTTTTTGTTGCTGATATGGCTGATTCTTTATACAGCCAACTCAGTTGTGGTGTGTGTCAGTGCTTTAGTGCCTAATTTCATTGTTGGGAATTCATTGGTTGCTGGTGTCATCGGTTCATTCTTCTTATTCTCTGGATACTTCATATCAAATCATGAAATTCCTAACTACTGGATTTTCATGCATTATATATCTCTGTTTAAGTATCCCTTTGAAGGGTTGCTCATAAATGAGTTCTCCAACTCAGGCAAGTGCTTGCAGTACATGTTTGGGGAATGCATACTGAGAGCAGAGAGTGTGCTTAAAGAAGAAGGGTATGGAGGAGAGAACAGAAGATGGAAGAATGTTGGGGTCATGGTGTCCTTCATCTTGTTTTACAGGTTCATTTCTTATGTTTTTCTTAGATACAGATGCTCTCAGAGGGGGTTCAAAAGTGTTGTCATCATCTAA 1932 0.4099 MKIQECEVEAIGINYKIHKQKTKHPFKVFSKPPTPDTKEDGQEQEEEAKYEQSCSGVKHVLKNVSCRAKAWEILAIVGPSGAGKSSLLEVLAGKVSPQNGTVLVNQKPVDKAQLKKLSGYVTQKDTLFPLLTVEETMMFSAMLKLKLPQEQLCSRVKSLIKELGLDHVAGTRIGDDRVRGISGGERRRVSIGVEIIHDPRVVILDEPTSGLDSNSALQIVDMLKVMADTKGRTIILSIHQPGFRIVKLFNSLLLLANGCLFHHGTADLLDVNLRLMGLNIPLHVNVIEFAIESIDAIQQQRCQLETPQEAMQQKKGDHAEETGECRSGKFTLQQLFHLSKVIDEEIINAGIDFPCDFANSRLRETMILTQRFSKNIFRTKELFACRTIQMLVSGLVLGSIFCNLKDDLVGAGEIVGLFAFILTFLLSTSIEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFSSPLYWLVGLNKNFMAFLHFLLLIWLILYTANSVVVCVSALVPNFIVGNSLVAGVIGSFFLFSGYFISNHEIPNYWIFMHYISLFKYPFEGLLINEFSNSGKCLQYMFGECILRAESVLKEEGYGGENRRWKNVGVMVSFILFYRFISYVFLRYRCSQRGFKSVVII 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1380 643 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Lal14g1380 643 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 631 - -
Lal14g1380 643 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 631 - -
Lal14g1380 643 MobiDBLite consensus disorder prediction 24 46 - -
Lal14g1380 643 Gene3D - 46 322 IPR027417 -
Lal14g1380 643 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 282 IPR003439 GO:0005524
Lal14g1380 643 Pfam ABC transporter 61 209 IPR003439 GO:0005524
Lal14g1380 643 SMART AAA_5 70 288 IPR003593 -
Lal14g1380 643 Pfam ABC-2 type transporter 365 573 IPR013525 GO:0016020|GO:0140359
Lal14g1380 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 267 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1380 Lal-Chr14 15168760 15170691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1380 29 307 Calmodulin-binding Proteins AT2G36910 23.973 1.37e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1380 K05681 - gmx:100789722 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1380 14 15168760 15170691 Lal7g0824 7 14917195 14917932 LSH
Lal14g1380 14 15168760 15170691 Lal19g0950 19 13486102 13488000 LSH