Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1376 ATGGCTGGTTGGTGGAGTAGAAACTCGTCCAAGAAGAAGCACAAGAAGGATGATGAAGAAGAAAAAAGTGGTAGTGCTAATTTTAATTGTATGAAATCATCAACCAGAAAAGGTAAGAAGGGAAAGGTTAAGGATAAGGGTAATAACTTTGATGAATTCTTGCCTCATGTTCAGAGAGTGTTTCAATACGGATATGCTTCTTCCACCTCTACCTCAGGTTCCAGTGCAACCTCTTCTGTCTCCTTTGATGATCACCCTACTTCACCTCATTTTCATTTTCCCAACAGAGGACAAGGCACTGACATGAAGTTGAATGTGAAGTCAAAAAGTAATGTTGGGTCAAGAGGGCCCACTTCTAACCCTGTTGCTGCATCACCCCTTTATCCAAGTTTGCATCTTTTCAGTCTTGACTCTGCTCAAGACCATGGACGGAGTCAAAGTCATGATCAATGTCATCCCTTGCCTCTTCCACCGCCACCACCACCACCCTCTCCTCCTCCTTTCAACACACAATTGTTAAAAAACACCATCAATAATCTTTCGAAGTGGCAAAAGGGGAAGCTTCTAGGACGAGGAACATTTGGCCATGTTTATCTTGGATTCAATAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTTAAGCTTGTCTTGGATGATCAAACATCAAAAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTTAATCAGCTTTCACATCCGAACATTGTTCAATACTATGGGAGTGAACTGGGCAAAGAAGTGCTTTCCGTTTATTTGGAATATGTATCTGGTGGTTCCATTCATAAACTACTTCAGGAATATGGTCCATTTAGTGAGCCTGTTATTCAAACTTATACCAGGCAGATTGTCTCCGGACTTGCGTATCTACATGGAAGAAATACAGTACACAGGGATATCAAAGGGGCTAACATATTAGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTCGGAATGGCTAAACATATAAATTCTTCCACCTCAATGCTTTCTTTCAAAGGAAGTCCACACTGGATGGCACCTGAGGTTGTCATGAATAAAAATGGCTACAGTCTGCCCGTTGATATTTGGAGCTTGGGTTGCACAATTCTTGAAATGGCGACAGCGAGGCCTCCATGGAGTCAGTTTGAAGGGGTAGCTGCTATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCTGAGCATCTTTCAAATGATGCAAAGAACTTCATTAAGCTATGCTTACATAGGAATCCATTAGCTCGCCCAACAGCCCAAAAGTTACTTGACCACCCCTTCATTCGAGATCAATCAGGAGCAAAAGCTTCAAATGTTGGCATAACCAGAGATGCTTTCCCCTACATGTTTGATGGAAGCCGGACATCGCCTGTTTTAAAGCCTCATTCGAATCGAACAAGTACGACTTCACACGATAGAGACTATGCAACTTTGCCAGCTCTCGCAGCTTCACGTGGGTCAAATAACCCCAGAGATCACACAGGAATGATTACATCTTTACCAGTGTCTCCCTCTTCAAGTCCATTGAGACAGTATGGGGCAGCACAAAAAAGCTGTTTCTTTTCTCCTCCTCATCCAAATTACACAACGACGCGACAAAATAATCACGCTTCATCATTTCCATTGATAGCGATGGATTCGAGTTCTGGGCAGCAGGAATTTGATTATTTGTTCAAATTGTTGATGATTGGTGACTCTGGTGTTGGCAAGAGTAGTCTACTTCTCTGTTTCACCGTCGATGATTTTCAAGATCTGTCACCCACAATTGGTGTTGATTTTAAGGTCAAATATGTGATGATGGGTGGTAAAAAGCTGAAGCTTGCCATTTGGGATACAGCTGGTCAGGAGAGATTCAGAACGCTGACAAGTTCTTACTACCGAGGGGCACAAGGGATCATTATGGTTTATGATGTAACCCGCCGAGAAACATTTACAAACCTTTCTGAAGTATGGGCAAAGGAAGTAGACCTTTATTCAACAAACCCTGATTGCATCAGGATGCTTGTTGGAAACAAAGTAGATAAGGAGGCTGATAGAGTTGTGACAAAGAAAGAGGGAATGGACTTTGCCAGGGAATGTGGTTGCCTATTTACTGAATGCAGTGCTAAAACTCGAGTTAATGTACAACAATGCTTTGAAGAGCTTATTTTGAAGATTCTGGATACACCTAGCCTCTTAGCCGAGGGCTCTAAAGGGGTAAAAAAGAACATTTTTAAGGACAAGCCATCCCTAGCATCACTAGTTTCACTACCCATTTCCCATGTTCTTAAACAGAAGCCAAAAGCTAGAATAATTGAGAATTGTCTAAGCAAATCATCACTTCCAAACAGGCGCTTATTTATCTTATCTCTGCCTCTGTCTAGTTACCTTATCCTTCCTGTTTTATCTTCATATGCTACTGTCACAACACAGTCACAGTATGACCCTGTAACTGATTCTGAAAGAGATGCAAGTGCTTTAATCTCAGAGAGAGTGTCACAAGCAGTGGAGTTGTTGGATAAAGGGAGGGAATTGCAGGCTCAGGGTGACTTCAATGGTGCTCTTCAATACTTCTCTCAGGTTATTGCAAGCTACAAAGACTTGGCATTCTCAGAGTACGCAAGGGTGGGAAGAGCACTGGCCTTGTATGAAGTTGGTGACAGAGAAGAAGCAATTGCAGAAATGGAAGACGTTTCAATATCTCTAAAAGGGTATCCAGAAGTACATGCAGCTCTTGCAGCAGCCTTATATGCAGATAAGCATGCTCCATTGCTTGCTGAAAACCAGTTCACTATTGCAACTCTGCTTGATCCCCAATTTATAGAACTTTCATATGTTAGAGACACAAAGCACTGGCCTCCAAGTTTGGTTAGTTCTCTGCAGCACTTCCTTACACTGTCTTAG 2916 0.4204 MAGWWSRNSSKKKHKKDDEEEKSGSANFNCMKSSTRKGKKGKVKDKGNNFDEFLPHVQRVFQYGYASSTSTSGSSATSSVSFDDHPTSPHFHFPNRGQGTDMKLNVKSKSNVGSRGPTSNPVAASPLYPSLHLFSLDSAQDHGRSQSHDQCHPLPLPPPPPPPSPPPFNTQLLKNTINNLSKWQKGKLLGRGTFGHVYLGFNSESGQMCAIKEVKLVLDDQTSKECLKQLNQEINLLNQLSHPNIVQYYGSELGKEVLSVYLEYVSGGSIHKLLQEYGPFSEPVIQTYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPHWMAPEVVMNKNGYSLPVDIWSLGCTILEMATARPPWSQFEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIKLCLHRNPLARPTAQKLLDHPFIRDQSGAKASNVGITRDAFPYMFDGSRTSPVLKPHSNRTSTTSHDRDYATLPALAASRGSNNPRDHTGMITSLPVSPSSSPLRQYGAAQKSCFFSPPHPNYTTTRQNNHASSFPLIAMDSSSGQQEFDYLFKLLMIGDSGVGKSSLLLCFTVDDFQDLSPTIGVDFKVKYVMMGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEVDLYSTNPDCIRMLVGNKVDKEADRVVTKKEGMDFARECGCLFTECSAKTRVNVQQCFEELILKILDTPSLLAEGSKGVKKNIFKDKPSLASLVSLPISHVLKQKPKARIIENCLSKSSLPNRRLFILSLPLSSYLILPVLSSYATVTTQSQYDPVTDSERDASALISERVSQAVELLDKGRELQAQGDFNGALQYFSQVIASYKDLAFSEYARVGRALALYEVGDREEAIAEMEDVSISLKGYPEVHAALAAALYADKHAPLLAENQFTIATLLDPQFIELSYVRDTKHWPPSLVSSLQHFLTLS 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1376 971 ProSiteProfiles small GTPase Rab1 family profile. 564 764 - -
Lal14g1376 971 MobiDBLite consensus disorder prediction 67 124 - -
Lal14g1376 971 SMART ran_sub_2 574 790 - -
Lal14g1376 971 CDD Rab18 569 730 - -
Lal14g1376 971 Pfam Ras family 570 731 IPR001806 GO:0003924|GO:0005525
Lal14g1376 971 Pfam Protein kinase domain 184 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1376 971 Gene3D Transferase(Phosphotransferase) domain 1 180 456 - -
Lal14g1376 971 MobiDBLite consensus disorder prediction 1 50 - -
Lal14g1376 971 Gene3D Tetratricopeptide repeat domain 829 951 IPR011990 GO:0005515
Lal14g1376 971 SUPERFAMILY TPR-like 831 947 IPR011990 GO:0005515
Lal14g1376 971 CDD STKc_MEKK1_plant 182 439 - -
Lal14g1376 971 ProSiteProfiles Protein kinase domain profile. 183 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1376 971 MobiDBLite consensus disorder prediction 139 169 - -
Lal14g1376 971 PANTHER MAP KINASE KINASE KINASE 67 560 - -
Lal14g1376 971 MobiDBLite consensus disorder prediction 101 124 - -
Lal14g1376 971 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 67 560 - -
Lal14g1376 971 SMART serkin_6 183 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1376 971 SMART rab_sub_5 569 733 - -
Lal14g1376 971 SMART ras_sub_4 566 733 - -
Lal14g1376 971 MobiDBLite consensus disorder prediction 11 25 - -
Lal14g1376 971 PRINTS Transforming protein P21 ras signature 569 590 - -
Lal14g1376 971 PRINTS Transforming protein P21 ras signature 591 607 - -
Lal14g1376 971 PRINTS Transforming protein P21 ras signature 609 631 - -
Lal14g1376 971 PRINTS Transforming protein P21 ras signature 673 686 - -
Lal14g1376 971 PRINTS Transforming protein P21 ras signature 708 730 - -
Lal14g1376 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 564 735 IPR027417 -
Lal14g1376 971 MobiDBLite consensus disorder prediction 67 85 - -
Lal14g1376 971 MobiDBLite consensus disorder prediction 152 169 - -
Lal14g1376 971 TIGRFAM small_GTP: small GTP-binding protein domain 567 724 IPR005225 GO:0005525
Lal14g1376 971 SMART rho_sub_3 571 733 IPR001806 GO:0003924|GO:0005525
Lal14g1376 971 SMART arf_sub_2 556 734 - -
Lal14g1376 971 ProSiteProfiles small GTPase Ras family profile. 561 803 IPR001806 GO:0003924|GO:0005525
Lal14g1376 971 Gene3D - 539 732 IPR027417 -
Lal14g1376 971 ProSiteProfiles small GTPase Rho family profile. 562 731 - -
Lal14g1376 971 SUPERFAMILY Protein kinase-like (PK-like) 180 512 IPR011009 -
Lal14g1376 971 ProSitePatterns Protein kinases ATP-binding region signature. 189 212 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1376 Lal-Chr14 15146358 15161194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1376 95 502 MAP Kinase Kinase Kinase AT1G53570 62.143 8.93e-165 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal14g1376 Pkinase 4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1376 K04421 - gmx:100787064 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1376 14 15146358 15161194 Lal7g0821 7 14907413 14913214 LSH
Lal14g1376 14 15146358 15161194 Lal4g0633 4 4697959 4702031 PCT
Lal4g0633 4 4697959 4702031 Lal14g1376 14 15146358 15161194 PCT