Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1372 ATGTCCTCTTTTTACTTACTCTCAATTCTCCTATTCCTCACTCTCTCCTCCGCCACCAACCACCACCACCATGCACCAAAACCATCACCCTTCATCGCTACCACCGCCACGCCGGCTATCCAACAAGCCTGCAAAGCCACTCACTCCCCTTTACAATGCGAATCCTCTCTCTCCAAATCCACGCTCCCACCAAACCCAACCTCCCTCCAGCTCCTCCAAGCCGTCATCGCCGTCTCCTCCACCAATCTCGCCACCACCCTAACCATGCTGAAATCCCTCCTCGACGCCTCCGCAGACAGTAAAAACCGCACAGTCGCCGCCACCACCTGCCTGGAACTCCTCCACAACTCCAACCACCGCATTTCCCTCGCCGACGAGTCCCTGCCACGTGGAAAGACCAAAGACGCACGCGCCTGGCTCAGCGCCGCACTCGCCTACACCTACGACTGCTGGAACTCCCTCAAGTACGCCAACGACACAAAACAAGTAGGCGAAACGATGTCGTTTCTAGATTCACTGTCCACGCTCAACAGCAACGCGCTCAGCATGGCGTTTAACTATGACGCGTTTGGAAACGACACCGCGTCATGGAAACCGCCAACGACAGAGCGTGACGGGTTCTGGGAGACAGTCGGGTCGGGTTATGGGTCCCGACCCGTAACCGAATTTCCTGATAAGTCAAATGCGGATGTTACAGTTTGTAAGGGAGTAGAAAGTGGGTGTTTGAAGACGGTTCAGGAAGCGGTTAATAAGGCACCGGATAACGTTAACGGCGGTGAGGGGAAGAGATTTGTGATATATGTAAAAGAAGGGGTTTATGAAGAGACCGTTAGGGTTCCGTTAAAGAAAGGGAATGTGGTGTTTTTGGGTGACGGAATGGGGAAGACGGTGATTACTGGTTCTGCGAATGTGGGGATGCCTGGTATGACTACATATAACTCCGCCACAGTCGCGGTTCTTGGCGATGGATTCATGGCGAAGGACCTTACAATAGAAAACACAGCAGGTCCTGATGCTCATCAAGCAGTGGCATTCAGATTAGACAGTGATCTTTCCATCATTGAGAATTGTGAATTCTTAGGCAACCAAGACACCCTTTATGCTCATTCACTGCGCCAATTTTACAAATCATGCCGCATCGAAGGCAATGTGGACTTCATCTTTGGCAACTCTGCTTCAGTTTTCCAGGATTGCCAAATCTTAGTTCGTCCAAGACAAGTGAAGCCTGAGAAAGGTGAGAAAAACGCCGTGACCGCACATGGCAGAATAGACCCGGCACAAGCAACAGGGTTTGTTTTCCAGAACTGTTTGATCAATGGAACTGAGGAATATATGGCACTGTATCATAGCAAACCCACAGTGCACAATAATTTCTTGGGTAGACCATGGAAGATGTATTCTAGAACAGTTTTCATTCAATGTCAGATGGAAATTCTTGTTACACCTCAGGGTTGGATGCCATGGGATGGTGACTTTGCACTGAAGACACTTTACTATGGAGAATTTGAGAATTCAGGACCTGGTTCTGATTTGTCTCAGAGAGTGTCCTGGAGTAGCAAGATCCCTGCTGAACATGTATTGACATATTCAGCGCAGAATTTCATCCAAGGAGATGATTGGATTCCATCATCTCAGTTTTCATCTGCCCAAGGTGATAAGAAAAATTAA 1668 0.491 MSSFYLLSILLFLTLSSATNHHHHAPKPSPFIATTATPAIQQACKATHSPLQCESSLSKSTLPPNPTSLQLLQAVIAVSSTNLATTLTMLKSLLDASADSKNRTVAATTCLELLHNSNHRISLADESLPRGKTKDARAWLSAALAYTYDCWNSLKYANDTKQVGETMSFLDSLSTLNSNALSMAFNYDAFGNDTASWKPPTTERDGFWETVGSGYGSRPVTEFPDKSNADVTVCKGVESGCLKTVQEAVNKAPDNVNGGEGKRFVIYVKEGVYEETVRVPLKKGNVVFLGDGMGKTVITGSANVGMPGMTTYNSATVAVLGDGFMAKDLTIENTAGPDAHQAVAFRLDSDLSIIENCEFLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNSASVFQDCQILVRPRQVKPEKGEKNAVTAHGRIDPAQATGFVFQNCLINGTEEYMALYHSKPTVHNNFLGRPWKMYSRTVFIQCQMEILVTPQGWMPWDGDFALKTLYYGEFENSGPGSDLSQRVSWSSKIPAEHVLTYSAQNFIQGDDWIPSSQFSSAQGDKKN 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1372 555 PANTHER PECTINESTERASE 4 544 - -
Lal14g1372 555 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 182 IPR006501 GO:0004857
Lal14g1372 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 183 IPR035513 -
Lal14g1372 555 SMART PMEI_2 35 183 IPR006501 GO:0004857
Lal14g1372 555 PANTHER PECTINESTERASE 4 544 - -
Lal14g1372 555 CDD PMEI-like_3 43 183 - -
Lal14g1372 555 SUPERFAMILY Pectin lyase-like 228 547 IPR011050 -
Lal14g1372 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 186 IPR035513 -
Lal14g1372 555 Pfam Pectinesterase 230 538 IPR000070 GO:0030599|GO:0042545
Lal14g1372 555 Gene3D - 225 551 IPR012334 -
Lal14g1372 555 Pfam Plant invertase/pectin methylesterase inhibitor 39 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1372 Lal-Chr14 15109715 15113251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1372 40 540 Carbohydrate Esterase AT5G09760 66.403 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1372 - - gmx:100819675 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1372 14 15109715 15113251 Lal19g0941 19 13408876 13412687 LSH
Lal14g1372 14 15109715 15113251 Lal17g0731 17 5182271 5186395 PCT
Lal17g0731 17 5182271 5186395 Lal14g1372 14 15109715 15113251 PCT