Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1339 ATGTTTATATCACTTATCCTTATTATTCGATATCTTAAATCAGTTTCAAGACCAATTGCCACAAAAACCCAATACAACAAATTCATTGAAAAGAAGAACCCCACAATCTGCTTCACAAGAAAATTGAGGCCACACCACATAGAATGCATGGTGTGTTTAACAGATTTTGAAGAAGGTGATAAAGTGAGAACGTTGGAATGCAAACACACTTTTCATAAGGATTGTTTGGATAACTGGTTGCAGAAATATTGTGCTACTTGTCCACTCTGCAGGAACAAAGTGTTGCCATCTAATGTTGCAACCAAGTATCAAGTTCAGCTTCAAAATCATGTAGCTTATAATAAAGTAAATGGGAAAATTTACTTAAACGATATAGTTTGA 381 0.3412 MFISLILIIRYLKSVSRPIATKTQYNKFIEKKNPTICFTRKLRPHHIECMVCLTDFEEGDKVRTLECKHTFHKDCLDNWLQKYCATCPLCRNKVLPSNVATKYQVQLQNHVAYNKVNGKIYLNDIV 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1339 126 SUPERFAMILY RING/U-box 28 97 - -
Lal14g1339 126 CDD mRING-H2-C3H2C2D_ZSWM2 48 91 - -
Lal14g1339 126 Pfam Ring finger domain 48 91 IPR001841 -
Lal14g1339 126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 97 IPR013083 -
Lal14g1339 126 PANTHER - 1 117 - -
Lal14g1339 126 SMART ring_2 49 90 IPR001841 -
Lal14g1339 126 ProSiteProfiles Zinc finger RING-type profile. 49 91 IPR001841 -
Lal14g1339 126 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1339 Lal-Chr14 14881468 14882092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1339 48 104 C3H Transcription Factor Family AT1G15100 47.368 3.24e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1339 K16282 - gmx:102661133 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1339 14 14881468 14882092 Lal14g1339 14 14881468 14882092 ECH
Lal14g1339 14 14881468 14882092 Lal7g0775 7 14558495 14559175 LSH