Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1304 ATGAAGAGACTTGGAAGTTCAGATTCTTTGGGTGCTCTCATGACAATTTGTCCACAAACAGAGGAACACAGTCCGAGGAACAATAAACACGTATATGGAAGGGAGTTTCAATCCATGTTAGAGGGACTTGATGTGGAAGGGTGTGGTATTGAAGAGACGGAGCATCACTCTGAGAAGAAAAGGAGACTTAGCATAGATCAAGTGAAGGCTTTGGAGAAAAACTTTGAGGTTGAGAACAAGCTTGAACCAGACAGAAAGGTGAAGCTTGCACAAGAACTTGGCTTGCAGCCTAGACAAGTTGCAGTTTGGTTCCAAAACCGTCGTGCTCGATATAAAACCAAGCAATTGGAAAGGGATTATGGAGTTCTCAAAGCCAATTATGATGCTCTTAAACTTAACTATGATACCCTCCAAAAGGACAACGAAGCCTTACTCAAAGAGATTAAGGAATTGAAATCAAGGGTGGAAGAAGAGAACACTGAAAGCGATGCTTCAGTGAAAGAAGAGATGATAACAGTGCAGCAAGACTCTTCAGAAGACTTGAAATATGACTGTTTCAACATGAACAATAGTGAAGGGGTTGAAGCTGGATCACTTTTCCCTACAGATTTCAACAAAGACGGGGCTTCAGATAGCGACTCTAGCGCAATCTTAAACGAAGAACAAAACCACAGCCCAATCAACCTAGCGATTTCTTCATCTGGGGTGCTTCAAAGTCACAACCTTTTGATGTCTCCTTCACTCAAGTTCAATAATTGTTCACCTTCTTCCATTAATTGCTTCCAGTTCCAGAAAGCTAGTTATCAGACACAGTATGTGAAGATGGAAGAACACGATTTCTTCAGCGCAGACGAGGCCTGCAATTTCTTCTCAGATGAACAAGCACCAACACTGCAGTGGTACTGTTCTGACTTATGA 918 0.4205 MKRLGSSDSLGALMTICPQTEEHSPRNNKHVYGREFQSMLEGLDVEGCGIEETEHHSEKKRRLSIDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARYKTKQLERDYGVLKANYDALKLNYDTLQKDNEALLKEIKELKSRVEEENTESDASVKEEMITVQQDSSEDLKYDCFNMNNSEGVEAGSLFPTDFNKDGASDSDSSAILNEEQNHSPINLAISSSGVLQSHNLLMSPSLKFNNCSPSSINCFQFQKASYQTQYVKMEEHDFFSADEACNFFSDEQAPTLQWYCSDL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1304 305 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Lal14g1304 305 PRINTS Lambda-repressor HTH signature 85 94 IPR000047 GO:0003677
Lal14g1304 305 PRINTS Lambda-repressor HTH signature 94 110 IPR000047 GO:0003677
Lal14g1304 305 Pfam Homeobox associated leucine zipper 114 155 IPR003106 GO:0006355|GO:0043565
Lal14g1304 305 CDD homeodomain 59 115 IPR001356 GO:0003677
Lal14g1304 305 SMART HOX_1 57 118 IPR001356 GO:0003677
Lal14g1304 305 Coils Coil 113 168 - -
Lal14g1304 305 Gene3D - 53 121 - -
Lal14g1304 305 Pfam Homeodomain 59 112 IPR001356 GO:0003677
Lal14g1304 305 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 298 IPR045224 GO:0003700
Lal14g1304 305 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 1 298 - -
Lal14g1304 305 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Lal14g1304 305 SUPERFAMILY Homeodomain-like 51 116 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1304 Lal-Chr14 14663791 14666455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1304 1 303 Homeobox Transcription Factor Family AT2G22430 46.450 9.09e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal14g1304 Homeodomain 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1304 K09338 - gmx:100796213 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1304 14 14663791 14666455 Lal21g1307 21 16352170 16355138 PCT