Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1303 ATGGATTTTCACAATAGAAAACTGCAGCATCAGCATCATTACCATGCTTCCACCACTGCTGCTAGTCCAACACCTTCTCCTTCCCCTCTCGAATCACCGGCACAGAAGCCGGAACCATGGCTTCCTGCCTCCGATTTCATCGGTGGTGATGACATAACAAACCATAACCATGCTCATTTACTTCAAGTAGCTTTAATTATTATGGCTTGCATGGTTGGCATGATTATGTCTCTTTGCATCATTTCCTTAATCTTAAGGCACTATTTCTCAAGAAGACTCAACCATAACAACAACAGAATAAGAAACTCGCCTATATTGTTCCATGTGAATGGAGACTCAGGTGTTGTTTCAGATAATGATGATGGACCAATGATTGAGCACCCTATATGGTTCATCCGCACAGAGGGTCTTCAACAATCACTGATAGATTCCATCACGGTTTTCAAATACAGAAAAGAAGAAGGGCTAATAGATGGGACAGTGTGTTCTGTTTGCCTCGGCGAGTTTGAACAACAAGAGAGTCTAAGACTCTTGCCTAAGTGCAGCCATGCATTTCATATTCCTTGCATTGATACTTGGTTAAGATCACATAAGAATTGCCCCTTGTGTCGCGCACCCGTTGTTCATGATGCTGGTGTTAATGGTAGTGGTACTGAGGTGAGTGTGAGTGAGGCTAATACAAGCGCTTTAGGTCAGAATCATATGGATAATAACATGGGTGGTACTAATGAGGAAGAAATAGGAACCAGTCACGTAGGAGAAAGTGAGAGTAGCACATTGAGGATTGAAAATGATGATTCAGAAGGAGGATATAGTGAAATCCCAGATAACATGTTGCCTAATTCTGAGAAGATAAATTTCCATGCTTTAGAAGTGGAAATACAACACATGATGAGGTCAGCGTCCATGGATTCTTCTTCTGCTCCTTTGGTATTTACTGATGTAGTGAGTTTAAATTGTGATGTAGAAGGCTCACACACAAACTTAGATGGCAAAATCAATTCACGTAACAAGGATATGGTTATTTCTAAGCATGGTAGTGGAAGTGGAAGTTCCACTATTTACAAACAGGCTTCAACAATTCCGCATGCATTGCAGAGAAAGCCTATTTCATTGAGAGGGTCTTTTTCACATAACACAAAATTGTTATTTTCTAGACATTGTAGGAGTCAGAGCTTAACTCTTCCCTTGTAA 1194 0.407 MDFHNRKLQHQHHYHASTTAASPTPSPSPLESPAQKPEPWLPASDFIGGDDITNHNHAHLLQVALIIMACMVGMIMSLCIISLILRHYFSRRLNHNNNRIRNSPILFHVNGDSGVVSDNDDGPMIEHPIWFIRTEGLQQSLIDSITVFKYRKEEGLIDGTVCSVCLGEFEQQESLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPVVHDAGVNGSGTEVSVSEANTSALGQNHMDNNMGGTNEEEIGTSHVGESESSTLRIENDDSEGGYSEIPDNMLPNSEKINFHALEVEIQHMMRSASMDSSSAPLVFTDVVSLNCDVEGSHTNLDGKINSRNKDMVISKHGSGSGSSTIYKQASTIPHALQRKPISLRGSFSHNTKLLFSRHCRSQSLTLPL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1303 397 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 21 389 IPR044675 -
Lal14g1303 397 MobiDBLite consensus disorder prediction 246 270 - -
Lal14g1303 397 ProSiteProfiles Zinc finger RING-type profile. 162 204 IPR001841 -
Lal14g1303 397 MobiDBLite consensus disorder prediction 1 37 - -
Lal14g1303 397 PANTHER RING-H2 FINGER PROTEIN ATL54 21 389 - -
Lal14g1303 397 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 211 IPR013083 -
Lal14g1303 397 SMART ring_2 162 203 IPR001841 -
Lal14g1303 397 SUPERFAMILY RING/U-box 143 212 - -
Lal14g1303 397 CDD RING-H2_PA-TM-RING 161 204 - -
Lal14g1303 397 Pfam Ring finger domain 161 204 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1303 Lal-Chr14 14654101 14655294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1303 66 273 C3H Transcription Factor Family AT1G72220 40.553 3.92e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1303 - - lja:Lj4g3v2731650.1 294.664