Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1294 ATGTTAGGTGGAGAAGAGGGTGATGGCTCTGCCGGAGCTGGTCACCGGAGAACTTATTCCCGGTCAGTTTCATGGACTGATCGAGCTCCGGCGAGCCGAAAGCCACCGAACAAGCCAAGGTCATTGTTGCCATCACTTCAGCCTCTTTCTATTAATAAACGCAGTGTTCAGGAGTGGCCAAGTGCTGGATCTGATGACCTTGGAGTTTGGCCACTTCCTCAGACTCCAAGAGGGTCAATCAGATCCACAGAACCGGGTGCTATGAAGGAGTTTCAATTCAAGAGGGAGAAGCTGGCTTTCTATGACAAAGAGTGTTCTAGAATTGCTGAACATGTGTACCTTGGAAGTGACACAGTTGCAAAGAACCATGAGCTCTTGAGGCAGAATGGGATCACTCATGTTCTTAATTGTGTTGGTTTTGTTTGCCCTGAATATTTCAAGAGTGATTTTGTCTATAAAACTCTTTGGTTGCAGGATAGTCCAACTGAGGACATCACTAGTATTCTATATGATGTTTTTGATTACTTTGAGGATGTTAGGGAGCAAGGTGGGCGTGTCCTTGTTCATTGCTGCCAAGGGGTTTCGAGATCAACGTCGTTGGTGATTGCATATATCATGTGGAGGGAGAGTCAGAGCTTTGAAGATGCTTTTCAGTATGTGAAGAATGCAAGAGGTGTCACCAATCCAAACATGGGTTTTGCTTGTCAACTGCTTCAGTGTCAGAAAAGGGTACATGCTATGCCTGCTAGTCCTAATTCTATTCTTAGGATGTATAGAGTTGCTCCTCATTCACCTTATGATCCTCTTCATTTGGTCCCTAAGATGGTTAACCAGCCATGTGCCCAAGCACTTGATTCTCGCGGCGCTTTTATTATCCATGTTCCGTCTGCTATATATGTCTGGACTGGTAGGAATTGTAACTGTGTCATGTCTTGTAATGCAAAATCGGCAGCTGATCAGGTCATACGGTATGAGAGGGCGAAAGGTCCAATTCTTATGATCCATGAGGATGAGGAGCCACAAGATTTTTGGATTGCTCTTTCCAATGAGCAATTATTATCAGGTACTTGTGATAAGGCAGAGGTCGAGAAGGTTGCGGCATTGGCTTCTTCTGAAAAAATGGAGATTGATGATACAGTTGATAAGCGGATTCGTCCAAGGAAAGTCAATGAATATGATTTAGATTTCGAGATTTTTCACAAGGCACTTGCTGGTGGTGTTGTTCCACCTTTTTCTGTGTCTAATGCTGAATCAGAAACCTGCCTTCCCGCTAGAGATCACGGTTGGGGGAGACTGAGGAGGAAGCTTGCTAGCGGTCTCATGAAAGGACTGTTCACAACCTGCAAAAACACAACCTCATCCAAAGATGAATCGAGCGTGATCATGGAAGAAGAAGAAGAAAAACATTCTGTTGTTGATCCTTCATCACCATCATCAAACCATCCTTGTGGTTCACCGGATTCGTTTGAATGTTTTCCAGATAACAGCTCAGACAGGACAAAAGATACACTTGAAGTCATGGACCACTTTGTTCCTAGTGTTGATTCGTCCCTACCACCGTCTCCTGGAGGAATGTCGGATTCCTTTGCTTGTTTCCTAAGCAACAGCCCAAAACTCAGTTCTAAATCGCCAACGCTTTCACCTTCAAGTTCTGATTATGCCAGTTCATTTACATTTTCACCTTCATCAACAAACTGGTCTTCTCGACTGCCATCACCTTCTAGCCTGGAATCAACTGAAGCCTTTTATGGTAAAGATGCATCTTTCTCAGATGGTTTCTTTTCACTTCAGAAAGAAGCCATCTCTTCACCTTCAGGGGCATTTTCGGCTAATCACACATTGGGAGGAGCAAACTTCTATTTTCCGAATAAATGCTCTTCTTCGCCTTCCATTGCAGAGCGCAGAGGGAGCAATCTGCCACCTCGCATGGTGCTACCCTCAGTCAATGAATCACCTCGTGCTCGCAAAGTCTTGGTAAGATCACAGTCATTCTCTTTGCCTGACTTGGATGATAATTTGAATAATGATGTTAGTTTCAAACAATCTGACCGAGACAGTGGAAAATGGCTAAAGACAGATGCTGATATTATTCCTATAGCTGTTGAAAATGAGAGCAATGACATAGGATCATTGTAG 2136 0.4396 MLGGEEGDGSAGAGHRRTYSRSVSWTDRAPASRKPPNKPRSLLPSLQPLSINKRSVQEWPSAGSDDLGVWPLPQTPRGSIRSTEPGAMKEFQFKREKLAFYDKECSRIAEHVYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTSLVIAYIMWRESQSFEDAFQYVKNARGVTNPNMGFACQLLQCQKRVHAMPASPNSILRMYRVAPHSPYDPLHLVPKMVNQPCAQALDSRGAFIIHVPSAIYVWTGRNCNCVMSCNAKSAADQVIRYERAKGPILMIHEDEEPQDFWIALSNEQLLSGTCDKAEVEKVAALASSEKMEIDDTVDKRIRPRKVNEYDLDFEIFHKALAGGVVPPFSVSNAESETCLPARDHGWGRLRRKLASGLMKGLFTTCKNTTSSKDESSVIMEEEEEKHSVVDPSSPSSNHPCGSPDSFECFPDNSSDRTKDTLEVMDHFVPSVDSSLPPSPGGMSDSFACFLSNSPKLSSKSPTLSPSSSDYASSFTFSPSSTNWSSRLPSPSSLESTEAFYGKDASFSDGFFSLQKEAISSPSGAFSANHTLGGANFYFPNKCSSSPSIAERRGSNLPPRMVLPSVNESPRARKVLVRSQSFSLPDLDDNLNNDVSFKQSDRDSGKWLKTDADIIPIAVENESNDIGSL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1294 711 CDD DSP 105 239 - -
Lal14g1294 711 Pfam Dual specificity phosphatase, catalytic domain 112 242 IPR000340 GO:0008138|GO:0016311
Lal14g1294 711 PANTHER MKPA PROTEIN 17 653 - -
Lal14g1294 711 MobiDBLite consensus disorder prediction 455 487 - -
Lal14g1294 711 ProSitePatterns Tyrosine specific protein phosphatases active site. 188 198 IPR016130 GO:0016311|GO:0016791
Lal14g1294 711 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 163 224 IPR000387 GO:0016311|GO:0016791
Lal14g1294 711 MobiDBLite consensus disorder prediction 458 472 - -
Lal14g1294 711 MobiDBLite consensus disorder prediction 43 59 - -
Lal14g1294 711 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 17 653 - -
Lal14g1294 711 Gene3D Protein tyrosine phosphatase superfamily 78 246 IPR029021 -
Lal14g1294 711 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 98 246 IPR029021 -
Lal14g1294 711 SUPERFAMILY Actin depolymerizing proteins 250 349 - -
Lal14g1294 711 MobiDBLite consensus disorder prediction 473 487 - -
Lal14g1294 711 MobiDBLite consensus disorder prediction 1 83 - -
Lal14g1294 711 ProSiteProfiles Dual specificity protein phosphatase domain profile. 104 246 IPR020422 GO:0006470|GO:0008138
Lal14g1294 711 Gene3D Severin 255 353 IPR029006 -
Lal14g1294 711 SMART dsp_5 104 243 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1294 Lal-Chr14 14598238 14600373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1294 1 140 Protein tyrosine phosphatase (PTP) family AT3G55270 38.378 2.47e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1294 - - lja:Lj6g3v0574850.1 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1294 14 14598238 14600373 Lal21g1314 21 16453689 16455182 PCT