Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1272 ATGCGGAGGCAACTTGTGTGTAGTGGGTGCAGGAGTGTTTTGCTTTACCCTGGAGGATCATCCACTGTTTGTTGTGGACTTTGCAACACAATTACCTCTGTTCCTCCACCTGATATGGAAATTTCTCAACTTTTATGTGGAGGATGTAGGATAATGATAATGTACGTATGTGGAGCTACAAGTGTGAGATGTTCCTCTTGTAACACTCTGACCCGTGTGCCAGCATCTAATCAATTCACCTATATTGACTGTGGGAATTGTCGAACTTCACTCATGTATTCTAATGGTGCTTCATCTGTTAAGTGTGCAATCTGTCACTATGTTACTGTTATCAGAATGACCAATGAAATGTTTCCAATTCCTGACCATAGTCCTAATGGAATGACCAACTCTGCAACAGTTTCCTCTACTTCAACATCAATGCCCCAATTTCAGAACCAAACTGTCATAGTAGAAAATCCAATGTCTGTTGATTCAAATGGAAACTTGGTGAGCAATGTTGTTCTTGGCATTATAACCGACAAAAAATAA 531 0.4011 MRRQLVCSGCRSVLLYPGGSSTVCCGLCNTITSVPPPDMEISQLLCGGCRIMIMYVCGATSVRCSSCNTLTRVPASNQFTYIDCGNCRTSLMYSNGASSVKCAICHYVTVIRMTNEMFPIPDHSPNGMTNSATVSSTSTSMPQFQNQTVIVENPMSVDSNGNLVSNVVLGIITDKK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1272 176 SUPERFAMILY Multiheme cytochromes 21 107 IPR036280 -
Lal14g1272 176 PANTHER PROTEIN LSD1 1 176 IPR040319 -
Lal14g1272 176 Pfam LSD1 zinc finger 84 108 IPR005735 -
Lal14g1272 176 Pfam LSD1 zinc finger 46 69 IPR005735 -
Lal14g1272 176 Pfam LSD1 zinc finger 7 31 IPR005735 -
Lal14g1272 176 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 4 34 IPR005735 -
Lal14g1272 176 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 43 73 IPR005735 -
Lal14g1272 176 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 82 111 IPR005735 -
Lal14g1272 176 PANTHER PROTEIN LSD1 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1272 Lal-Chr14 14467230 14471167 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Lal14g1272 zf-LSD1 1.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1272 - - lang:109338925 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1272 14 14467230 14471167 Lal19g0836 19 12435734 12439817 LSH