Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1253 ATGGAAAGCATTGCCGCGCAGCTTAAGCGCGGCATCTCCCGCCAATTCTCCTCAGGTGGCGGTGCATCTATGCGTCGCCAACTGAGCAGACAATTTACGCGCCAGTCCTCACTGGACCCCAGGCGTAACAACCTGAGGTTCAGCTTTGGAAGGCAGTCGTCGCTTGATCCGATCCGGCGTGGGAGTCCTACGCCGGATCACATCGAGCTGACGGGGGACGTGAAGGGAGTAGAGGATTTGTTGAACGAGGGCATTGACGTAAATAGCATCGACCTTGATGGCCGTACGGCTCTTCACGTTGCTGCTTGTGAGGGACATGTTGAGGTTGCTAGGCTCTTACTTTCTCGTAAGGTTAATATCGATGCTCGTGATCGCTGGGGCAGTACGGCAGCAGCTGATGCCAAGCATTATGGAAATTCAGAAATTTATTATATGCTGAAGGCCCGTGGAGCAAAAGTGCCGAAAGCCAAGAAGACTCCAATGACTGTTGCAAATCCGCGTGAAGTTCCAGAATATGAACTCAATCCATTAGAACTCCAGGTCAGGAAGAGTGATGGTATTTCGAAGGGTACATATCAAGTGGCTAAATGGAATGGCACAAAAGTTTCAGTGAAGATACTTGATAAGGACAGTTATTCAGATCCTGATAGCATAGATGTCTTCAAACACGAGCTTACATTATTAGAAAGGGTACGGCATCCTAATGTGGTTCAGTTTGTTGGAGCTGTCACCCAAAATATACCTATGATGATTGTTAGAGAATATCATGCTAAGGGTGACCTGGCAAGCTATCTTCAAAAGAAAGGCCGTCTTTCCCCATCAAAAGCTCTACGATTTGCTCTCGATATTGCCAGGCAAGTAACTATTTTAAGTAGCTATGCTGTACAAATTTTTGTGAACACGGGAATGAACTATCTGCATGAATGCAAACCAGATCCAATTACCCACTGTTGCTTAACGCCAAAAAATATTTTGCTGGATAATGGAGGGCAATTGAAGATAGCTGGATTTGGCAATGTGAGATTATCAGGAATGTCATCTGATAAAGTAAGGCTGATACAGCCTGAGCCTAATATTGACCTTTCAAATTTGTACTTGGCACCAGAGATTTACAAAGATGGAGAATTTGATAGAAGTGTGGATGCATACTCTTTTGGTCTCATTATATATGAGATGATAGAAGGGACACAGCCCTTTCACCCCAAGTCCGCCGAGGAGGCTGTGAAACTCATGTGCTTAGAAGGGAAAAGACCAACATTCAAGATCAAAACAAAACATTATCCTCCGGATATGAAAGAATTGATTGAGGAATGCTGGGATCCAGAGCCTGTTGTCAGGCCAACATTTTCACAGGTCATTGTACGGTTGGACAAAATTGTTGCAAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTCCCTTGGAAATAA 1437 0.4454 MESIAAQLKRGISRQFSSGGGASMRRQLSRQFTRQSSLDPRRNNLRFSFGRQSSLDPIRRGSPTPDHIELTGDVKGVEDLLNEGIDVNSIDLDGRTALHVAACEGHVEVARLLLSRKVNIDARDRWGSTAAADAKHYGNSEIYYMLKARGAKVPKAKKTPMTVANPREVPEYELNPLELQVRKSDGISKGTYQVAKWNGTKVSVKILDKDSYSDPDSIDVFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLASYLQKKGRLSPSKALRFALDIARQVTILSSYAVQIFVNTGMNYLHECKPDPITHCCLTPKNILLDNGGQLKIAGFGNVRLSGMSSDKVRLIQPEPNIDLSNLYLAPEIYKDGEFDRSVDAYSFGLIIYEMIEGTQPFHPKSAEEAVKLMCLEGKRPTFKIKTKHYPPDMKELIEECWDPEPVVRPTFSQVIVRLDKIVANCSKQGWWKDTFKLPWK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1253 478 Pfam Protein tyrosine and serine/threonine kinase 188 455 IPR001245 GO:0004672|GO:0006468
Lal14g1253 478 ProSiteProfiles Ankyrin repeat profile. 93 125 IPR002110 GO:0005515
Lal14g1253 478 ProSiteProfiles Ankyrin repeat region circular profile. 93 125 - -
Lal14g1253 478 PIRSF ILK 8 477 - -
Lal14g1253 478 SUPERFAMILY Ankyrin repeat 71 163 IPR036770 -
Lal14g1253 478 SMART ANK_2a 93 122 IPR002110 GO:0005515
Lal14g1253 478 Gene3D - 68 173 IPR036770 -
Lal14g1253 478 SUPERFAMILY Protein kinase-like (PK-like) 193 456 IPR011009 -
Lal14g1253 478 Gene3D Phosphorylase Kinase; domain 1 174 256 - -
Lal14g1253 478 Pfam Ankyrin repeats (many copies) 80 130 IPR002110 GO:0005515
Lal14g1253 478 MobiDBLite consensus disorder prediction 15 59 - -
Lal14g1253 478 Gene3D Transferase(Phosphotransferase) domain 1 257 472 - -
Lal14g1253 478 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 23 476 - -
Lal14g1253 478 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 23 476 - -
Lal14g1253 478 MobiDBLite consensus disorder prediction 15 66 - -
Lal14g1253 478 ProSiteProfiles Protein kinase domain profile. 177 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1253 Lal-Chr14 14339912 14346071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1253 1 477 MAP Kinase Kinase Kinase AT2G43850 70.423 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lal14g1253 PK_Tyr_Ser-Thr 9.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1253 - - gmx:100810411 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1253 14 14339912 14346071 Lal19g0816 19 12223572 12230106 LSH