Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1249 ATGGGTAATTGTTGGTGTAAGTTGGAACCATCAGATTATAGAGTCTCAGCCAATGTAAAGTCAGAGCAAAAGCAGGTAATGAAAGAAAGGAATGATGATAATAAGTTACCATCAAATCCTGAAGAAGTAGAAGACCTACGTGGAAATTCAGCTGTGAATCCATTAGTTGCATTCACTTATGATGAATTAAAGATAATCACTGCAAATTTTAGGTCAGATAGTGTATTGGGAGGAGGAGGATTTGGAAGTGTTTATAAAGGCTTTATTTCTGAGGAGTTAAGGGAAGGTCTTCCTTCTCTTGCTGTAGCTGTTAAGGTTCATGATGGTGACAATAGTCATCAAGGGCATAGAGAATGGCTGGCAGAAGTTATATTTTTGGGACAGCTTTCACATCCAAATCTAGTGAAGTTGATTGGATATTGCTGTGAAGATGAACATAGGGTGCTAATATATGAGTATATGGCTCGGGGAAGTGTGGAGAATAATTTGTTTTCAAAAATATTGCTTCCTATGCCATGGTCCATAAGAATGAAGATTGCATTAGGTGCTGCAAAGGGACTTGCATTTCTTCATGAAGCAGACAAACCTGTCATATATCGTGATTTTAAGACATCAAATATTTTATTGGACCTGGAGTATAATGCAAAACTTTCTGACTTTGGCCTTGCCAAAGATGGACCAGTTGGAGACAAATCCCATGTTTCGACTCGGATAATGGGAACATATGGGTATGCTGCACCCGAATACATAATGACAGGTCATCTAACCCCTAGAAGTGATGTTTACAGTTTTGGTGTTGTTCTTCTTGAACTTCTAACTGGGAGAAAATCCTTAGACAGGTTAAGACCTGCTAGAGAGCAGAACCTAGTAGATTGGGCTCTTCCCTTGCTGAAGGAAAAGAAGAAATTGCTAAATATTATAGATCCAAGGCTGGAAGGTGATTATCCAATAAAAGGAGTTTACAAGGCTGCAATGCTTGTTTATCATTGCTTGAACCGCAATCCAAAAGCGAGGCCTCTAATGCGCGATATAGTAGATTCATTGGAGCCTTTGCAGCAAGCAAGCAATGAGGTCTATAATGAAAAAACATTCACCATAATCAATGAGGTTCCTGAAGCATATTTATAA 1128 0.3874 MGNCWCKLEPSDYRVSANVKSEQKQVMKERNDDNKLPSNPEEVEDLRGNSAVNPLVAFTYDELKIITANFRSDSVLGGGGFGSVYKGFISEELREGLPSLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMARGSVENNLFSKILLPMPWSIRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDLEYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDRLRPAREQNLVDWALPLLKEKKKLLNIIDPRLEGDYPIKGVYKAAMLVYHCLNRNPKARPLMRDIVDSLEPLQQASNEVYNEKTFTIINEVPEAYL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1249 375 Gene3D Transferase(Phosphotransferase) domain 1 154 370 - -
Lal14g1249 375 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
Lal14g1249 375 MobiDBLite consensus disorder prediction 23 42 - -
Lal14g1249 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lal14g1249 375 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 11 361 - -
Lal14g1249 375 PANTHER OS01G0588500 PROTEIN-RELATED 11 361 - -
Lal14g1249 375 Gene3D Phosphorylase Kinase; domain 1 33 153 - -
Lal14g1249 375 Pfam Protein tyrosine and serine/threonine kinase 73 348 IPR001245 GO:0004672|GO:0006468
Lal14g1249 375 SUPERFAMILY Protein kinase-like (PK-like) 45 348 IPR011009 -
Lal14g1249 375 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1249 375 MobiDBLite consensus disorder prediction 19 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1249 Lal-Chr14 14300277 14306552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1249 30 348 Glycoside Hydrolase AT3G07070 49.848 1.44e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal14g1249 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1249 - - gmx:100775722 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1249 14 14300277 14306552 Lal19g0812 19 12179296 12185366 LSH