Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1244 ATGGCAATGAATAATAGACGATTGGAATTCGGGAGGCCTGCATCGGGTAAAAGAAGAATGAAGGATTTATTGCTTCATAAAGATAATCGATTTTGTGCTGATTGTAATGCTCCAGATCCTAAATGGGCGTCAGCCAATATTGGAGTTTTTGTGTGTTTAAAATGCTGTGGTGTGCACAGAAGCCTTGGTACTCATATATCAAAGATTTATTCTGTGACATTGGATGAATGGACAGAAGAAGAAATTGATGCAATGATTGAAGTTGGAGGAAATGCTTCAGCTAATTCAATTTATGAGGCTTATCTTCCAGAAGGATATACTAAACCTGCATCAGACGCCAGTCACGAGCAGCGCGCAAAGTTCATCAGATCAAAGTATGAGCACCAAGAATTTTTGAAACCTAGTTTGCGAATCGTGTCGGGAAAAAGCAGCAATAAAAACAGTTTTAAAGCAAGTTTTTCCAAAAGGCTTATGGATAGCTTTAGAAAAAGCACTAGTACTTCAAAGAATATGGAAGGAATGGTAGAATTTATTGGAATGTTGAAGGTAAAAGTGATTAAAGGCACTGATTTAGCTATCAGAGATATGATGACAAGCGATCCATATGTCATCTTGAAACTTGGCCAACAGACTGTTCAGACAACTATAATAAAGAGTAACTTGAATCCAGTATGGAATGAGGAGCTTATGCTGTCTGTTCCTCAAGAATTTGGACAATTGAGTTTGCAAGTATATGATCATGACATGTTTTCTGCGGATGATATAATGGGAGAGGCAGACATTGATCTTCAACCACTGATAACATCTGCAATGGCATTTGGAGATGCTGGAATGTTTGATGATATGCAAATAGGAAAATGGCTAAAATCACATGACAATGCACTTATAGATGATAGCACAGTTAATATTATTGATGGTAAGGTTAAACAAGAAATGTCACTCAAGCTTCAGAATGTTGAATGTGGAGAACTAGACTTAGAACTTGAATGGATGCCTCTTGATCATTAG 1008 0.372 MAMNNRRLEFGRPASGKRRMKDLLLHKDNRFCADCNAPDPKWASANIGVFVCLKCCGVHRSLGTHISKIYSVTLDEWTEEEIDAMIEVGGNASANSIYEAYLPEGYTKPASDASHEQRAKFIRSKYEHQEFLKPSLRIVSGKSSNKNSFKASFSKRLMDSFRKSTSTSKNMEGMVEFIGMLKVKVIKGTDLAIRDMMTSDPYVILKLGQQTVQTTIIKSNLNPVWNEELMLSVPQEFGQLSLQVYDHDMFSADDIMGEADIDLQPLITSAMAFGDAGMFDDMQIGKWLKSHDNALIDDSTVNIIDGKVKQEMSLKLQNVECGELDLELEWMPLDH 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1244 335 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 179 323 IPR035892 -
Lal14g1244 335 Pfam Putative GTPase activating protein for Arf 18 133 IPR001164 GO:0005096
Lal14g1244 335 CDD ArfGap 20 126 - -
Lal14g1244 335 CDD C2_ArfGAP 178 322 - -
Lal14g1244 335 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 10 335 - -
Lal14g1244 335 Gene3D C2 domain 177 335 IPR035892 -
Lal14g1244 335 ProSiteProfiles C2 domain profile. 162 276 IPR000008 -
Lal14g1244 335 SUPERFAMILY ArfGap/RecO-like zinc finger 17 134 IPR037278 -
Lal14g1244 335 Gene3D Arf GTPase activating protein 4 138 IPR038508 -
Lal14g1244 335 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Lal14g1244 335 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Lal14g1244 335 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Lal14g1244 335 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 10 335 IPR044518 GO:0005096|GO:0005543
Lal14g1244 335 SMART arf_gap_3 18 139 IPR001164 GO:0005096
Lal14g1244 335 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 131 IPR001164 GO:0005096
Lal14g1244 335 Pfam C2 domain 180 269 IPR000008 -
Lal14g1244 335 SMART C2_3c 180 275 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1244 Lal-Chr14 14276163 14279643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1244 10 335 C2H2 Transcription Factor Family AT4G21160 71.515 0.0 518