Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1217 ATGAATGAACACGAAGATAGTGACCTAGGAATTCAAGAAAACTTTGCAGAGTCTCCTCCTTCTTCTATCGTGTATAACATGGGTGGCATGGTTACTTCTCCATCCACTTCTTCCTCTTCACTTAAGAAAAGCCGGCAAGGCAAGCAGAAAAGGGTTGTACAAATCCCAATGAAGGAAACAGAAGGTTCAATCAGCAACACTCCACCCTCAGATTCATGGGCATGGCGAAAATACGGCCAGAAACCCATCAAAGGCTCCCCTTATCCCAGAGGATACTACAGATGTAGCAGTAACAAAGGATGTCCAGCAAGGAAACAAGTGGAGAGAAGCCGCATAGACCCCACAATGCTCATGGTTACTTACTCCTCCGAACACAACCATGCCTTACCAGTTTTCAAAAACCATCACCACCATAATCACAATCACACCAACAATAACAACCACTCTTCCTCCGTTGCTGCAAAACCCATCATCAAACCGGAACCAGAACCGGACCGGCTAATTGCGGAGCCGGTCGAACCGGAGGATAAGTTTGCAGATGAGTTCGGGTGGTTGGGCGAGATGGAGACAATTGCAACGACGTCGTCCAACGTTCTTGAGGGTCCAATATTTGGTGGGTACGATAATGATGTGGTATCGGTGTCAATGCCTATGAGGGAGGAGGACGAGTTGCTGTTCGCTGACCTCGAGGAACTGCCGGAGTTCTCTCCGGTATTCAAGCAGGGGCCACTAGAGACCACGGAGGAATGGCCGCGGTGGTGTGGGACCATAAGCTAG 777 0.4916 MNEHEDSDLGIQENFAESPPSSIVYNMGGMVTSPSTSSSSLKKSRQGKQKRVVQIPMKETEGSISNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSNKGCPARKQVERSRIDPTMLMVTYSSEHNHALPVFKNHHHHNHNHTNNNNHSSSVAAKPIIKPEPEPDRLIAEPVEPEDKFADEFGWLGEMETIATTSSNVLEGPIFGGYDNDVVSVSMPMREEDELLFADLEELPEFSPVFKQGPLETTEEWPRWCGTIS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1217 258 SMART WRKY_cls 69 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal14g1217 258 ProSiteProfiles WRKY domain profile. 70 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal14g1217 258 Gene3D WRKY domain 57 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal14g1217 258 MobiDBLite consensus disorder prediction 59 73 - -
Lal14g1217 258 MobiDBLite consensus disorder prediction 14 43 - -
Lal14g1217 258 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 256 IPR044810 GO:0003700
Lal14g1217 258 Pfam WRKY DNA -binding domain 71 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal14g1217 258 PANTHER OS01G0750100 PROTEIN 10 256 - -
Lal14g1217 258 MobiDBLite consensus disorder prediction 1 77 - -
Lal14g1217 258 SUPERFAMILY WRKY DNA-binding domain 66 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1217 Lal-Chr14 14106196 14108720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1217 2 241 WRKY Transcription Factor Family AT1G29280 49.398 2.38e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal14g1217 WRKY 2.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1217 14 14106196 14108720 Lal14g1217 14 14106196 14108720 ECH
Lal14g1217 14 14106196 14108720 Lal19g0775 19 11899759 11902174 LSH