Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1196 ATGTCTTCAGAAAACAGTGAGATCCTCCTCTCTGGTTATGAGATCAACTCTACTCTTAGGCGCAGGACACACTTGGTTCAATCTTTCTCTGTTCATAAATCATATCGCATGGCTTCTTCTCCTGGTTCTGGTGGTTCAAGCTCTCTTCAAAACTCTCCATATGGTTCTGAGGGAGACCAACAGCCACAACATGTGATGGATCAAAAGAAGAGGAAGAGAATGCTGTCTAATAGAGAATCAGCACGAAGATCAAGGATGAAGAAGCAGAAGCACCTTGATGGTCTAATTGCTCAAGTTGATGAGCTCAACAAAGAGAACAATCAAATAAGCACAAGTGTAGAAATCACTAGTCAGCATTACTTGAAGATTGAGGCTGAGAATGCTATTATTAGGGCTCAGGTTGCAGAACTAAGCAACAGGTTGCAGTCTCTTAATGAAATCATAGATTCTATAAACTCACCATGCAATTATTTCATTGATGAAGCTGATCAGGAGACTTTGTTCAATGATTGTGGCTTCATAATGGACCCTTGGAACTATGTGAATGTCAATCAACCAATCATGGTATCTGCTGACATGTTCATGTATTGA 591 0.4027 MSSENSEILLSGYEINSTLRRRTHLVQSFSVHKSYRMASSPGSGGSSSLQNSPYGSEGDQQPQHVMDQKKRKRMLSNRESARRSRMKKQKHLDGLIAQVDELNKENNQISTSVEITSQHYLKIEAENAIIRAQVAELSNRLQSLNEIIDSINSPCNYFIDEADQETLFNDCGFIMDPWNYVNVNQPIMVSADMFMY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1196 196 MobiDBLite consensus disorder prediction 35 90 - -
Lal14g1196 196 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 37 195 - -
Lal14g1196 196 SUPERFAMILY Leucine zipper domain 69 121 IPR046347 GO:0003700|GO:0006355
Lal14g1196 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 67 130 IPR004827 GO:0003700|GO:0006355
Lal14g1196 196 Pfam bZIP transcription factor 69 124 IPR004827 GO:0003700|GO:0006355
Lal14g1196 196 Gene3D - 67 122 - -
Lal14g1196 196 PANTHER BZIP TRANSCRIPTION FACTOR 44 37 195 - -
Lal14g1196 196 SMART brlzneu 65 129 IPR004827 GO:0003700|GO:0006355
Lal14g1196 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Lal14g1196 196 CDD bZIP_plant_GBF1 70 120 IPR045314 GO:0003700|GO:0006355
Lal14g1196 196 MobiDBLite consensus disorder prediction 63 82 - -
Lal14g1196 196 Coils Coil 120 147 - -
Lal14g1196 196 Coils Coil 85 112 - -
Lal14g1196 196 MobiDBLite consensus disorder prediction 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1196 Lal-Chr14 13965302 13966074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1196 65 196 bZIP Transcription Factor Family AT4G34590 53.623 8.91e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal14g1196 bZIP_1 3.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1196 K25786 - nnu:104595624 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1196 14 13965302 13966074 Lal7g0680 7 13796710 13797216 LSH
Lal14g1196 14 13965302 13966074 Lal19g0745 19 11470732 11471229 LSH