Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1193 ATGGGTATGCAACATGACAATAACCAAAAGGAAAAAGAGAAAGTGAAGATGAAGAACAAGTCCAACAAGTTTGTTGGAGTGAGACAAAGGGCTTCAGGGAAATGGGCAGCAGAAATTAAAGACACATCAAAGAAGATTAGAATATGGCTTGGAACTTATAGAACTGCTGAAGAAGCTGCTAGAGCTTATGATGAAGCTGCATGCCTCCTTAGAGGTTCAAACACTCGCACTAACTTGTCTACTCATCATCATGCCATTGCTATCAATTCTCCTATATCTCTTAAAATCAAAAAACTACTTGATCATAATAAAGCCATGTCAAATCAAATCAAACTTCAAAACCAATCCACTATGTCCACAAGTCTCACTGTCCAAGGTGTTTCTAGTGAAGTGATTCCAAATGGTAGTGTTGGTATCAATAGCATCATGGTCATGGAAGATAACAATGCTGCATGTAGTGAAGATAAGTCTTTGTTTTGGGTTCAAAACCAAGTCTATGATACTAGGCCATATAGGCCAGATATTAATATGATGAACTATTCAATGGACCTTGTTGAACCAAATACATGTCAGTTTGATTATTCTTGGCCATTGTCACAACTAAGGAGTAATGAGTTACCAATGCTATCACCAAAAGATGGCTTGAATGAGTGTTATATGGAGGATCTATATCAATATGAATATGATGCCAATTACCCTCTTCCTCATTTCTTCTGGTTCACTTGA 726 0.3719 MGMQHDNNQKEKEKVKMKNKSNKFVGVRQRASGKWAAEIKDTSKKIRIWLGTYRTAEEAARAYDEAACLLRGSNTRTNLSTHHHAIAINSPISLKIKKLLDHNKAMSNQIKLQNQSTMSTSLTVQGVSSEVIPNGSVGINSIMVMEDNNAACSEDKSLFWVQNQVYDTRPYRPDINMMNYSMDLVEPNTCQFDYSWPLSQLRSNELPMLSPKDGLNECYMEDLYQYEYDANYPLPHFFWFT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1193 241 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Lal14g1193 241 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 7 184 - -
Lal14g1193 241 CDD AP2 23 78 IPR001471 GO:0003700|GO:0006355
Lal14g1193 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 7 184 - -
Lal14g1193 241 SUPERFAMILY DNA-binding domain 23 80 IPR016177 GO:0003677
Lal14g1193 241 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Lal14g1193 241 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lal14g1193 241 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lal14g1193 241 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Lal14g1193 241 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1193 Lal-Chr14 13949311 13950036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1193 3 224 AP2-EREBP Transcription Factor Family AT5G19790 42.342 6.57e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal14g1193 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1193 K09286 - gmx:100803832 244.588