Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1171 ATGCGTTGTTACATTTTAACTATTCCCCCAACCAACACTCGTTTCTACCACCATGTCCCAACTTCTCCAACCCCACTCTCTCTCCGACCCATTTTCACTTACCCGACCCGAATCAGATTCGGGTCACTCAGAACAGAAGCCTCCATCAACGGCGGCCACGTGCTATCTGAGGAGGCTTCTCAGTTGAGCTTCTATGAGCTTCTGGGGATACCGTTATCGGGTTCGTTAATGGAGATCAAGCAAGCTTATAAGAAACTTGCACGAAAGTATCACCCAGATGTGTCTCCTCCGGGTCGGGTTGAGGAATATACGAAGAGGTTTATTCTTGTTCAGGAGGCTTATAAGACCCTTTCAGATCCTAGACTTAAAGCTATGTATGATAGAGATATTCATTTAGCTTTCAATGCTTGTTGA 414 0.4565 MRCYILTIPPTNTRFYHHVPTSPTPLSLRPIFTYPTRIRFGSLRTEASINGGHVLSEEASQLSFYELLGIPLSGSLMEIKQAYKKLARKYHPDVSPPGRVEEYTKRFILVQEAYKTLSDPRLKAMYDRDIHLAFNAC 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1171 137 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 30 132 - -
Lal14g1171 137 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 30 132 - -
Lal14g1171 137 CDD DnaJ 64 119 IPR001623 -
Lal14g1171 137 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Lal14g1171 137 PRINTS DnaJ domain signature 65 83 IPR001623 -
Lal14g1171 137 PRINTS DnaJ domain signature 83 98 IPR001623 -
Lal14g1171 137 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lal14g1171 137 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Lal14g1171 137 Gene3D DnaJ domain 51 136 IPR036869 -
Lal14g1171 137 SMART dnaj_3 62 122 IPR001623 -
Lal14g1171 137 Pfam DnaJ domain 64 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1171 Lal-Chr14 13809155 13809568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1171 56 127 C2H2 Transcription Factor Family AT1G74250 38.667 2.16e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1171 - - lang:109341995 216.853