Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1170 ATGCGTTGTTACACGTTAACTATTCCCCCAACCAACACTCGTTTCTACCACCATGTCCCCACTTCTCCAAACCCACTCTCTCTCCGACCCATTTTCACTTACCCGACCCGAATCAGATTCGGGTCACTCAGAACAAAAGCCTCCATCAACGGCGGCCATGTGGTATCTGAGGAGGCTTCTCAGTTGAGCTTCTATGAGCTTCTGGGGATACCGTTATCAGGTTCATTAATGGAGATCAAGCAAGCTTATAAGCAACTTGCACGAAAGTATCACCCAGATGTGTCTCCTCCGGGTCGGGTTGAGGAATATACGAAGAGGTTTATTCTTGTTCAGGAGGCTTATGAGACCCTTTCAGATCCTAGACTTAAAGCTATGTATGATAGAGACATGGCTAGGGGTATTCATCTAGCTTTCAATGCTCGTACACGCTATCATGATGATGATGATGTGGTTGAACAAAAAAGTCAATGGAAAAGTCGATGGCAATCGCAATTGTTCGAAATGAAGAGAAGAAGTGAGAGCAAGAATGGTGGAGGGAATATGTCATGGGCAGCTAGAATGCGCCAGCAGAGGGATCAATCAGAAGAAGAATTATGA 597 0.4539 MRCYTLTIPPTNTRFYHHVPTSPNPLSLRPIFTYPTRIRFGSLRTKASINGGHVVSEEASQLSFYELLGIPLSGSLMEIKQAYKQLARKYHPDVSPPGRVEEYTKRFILVQEAYETLSDPRLKAMYDRDMARGIHLAFNARTRYHDDDDVVEQKSQWKSRWQSQLFEMKRRSESKNGGGNMSWAARMRQQRDQSEEEL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1170 198 Gene3D DnaJ domain 50 156 IPR036869 -
Lal14g1170 198 PRINTS DnaJ domain signature 65 83 IPR001623 -
Lal14g1170 198 PRINTS DnaJ domain signature 83 98 IPR001623 -
Lal14g1170 198 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lal14g1170 198 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Lal14g1170 198 SMART dnaj_3 62 122 IPR001623 -
Lal14g1170 198 CDD DnaJ 64 119 IPR001623 -
Lal14g1170 198 MobiDBLite consensus disorder prediction 168 198 - -
Lal14g1170 198 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 30 195 - -
Lal14g1170 198 Pfam DnaJ domain 64 127 IPR001623 -
Lal14g1170 198 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 30 195 - -
Lal14g1170 198 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lal14g1170 198 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1170 Lal-Chr14 13804185 13806661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1170 65 127 C2H2 Transcription Factor Family AT1G74250 43.939 2.98e-07 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1170 14 13804185 13806661 Lal14g1170 14 13804185 13806661 ECH