Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1143 ATGAGTTTGCTTCATGTAGTTGGGTATGGTTTAAAAGTAGGGCATCCACTTTTAGTGCTATGTTGCTGGCTTGTGTCTGTCCTTTACCTCAATTGGTTCTTCAGTAGTGGAACTATGGACACAAAGATGAGTTTTTTGGGTGATGGTGGTGGCAAGAGCATGTGGCTCAAATGGTGGGAGAAGATCTATGGCTGCAACATTCATCAACATTACTACCAGTATATATGGTCCCAGAAAGTGAAGAGAACTTTGTGGAAGAAGCTTTTGGTTTCATGGGTTGTTGGTTGGACCATGATGTCTTTGTGGATCTTCTGTTCCATGAGCTTACAAGCTACTGAGAAGAGGAAAGAAACTCTTTCCAGCATGTGTGATGAAAGGGCTAGGATGCTTCAGGATCAGTTTAATGTCAGTATGAACCATATCCAAGCCATGTCCATTCTGATCTCAACTTTCCACCATGCCAAGAGCCCCTCAGCTATAGATCAGAAGTTGCAGAGAACTTTTGCTAAGTACACAGAAAGAACAGCTTTTGAGAGGCCTCTTACAAGTCTTGCTTATGCCGTAAGGGTGCTCCGTTCTGAAAGGGAACAATTTGAGAAGCAACAAGGGTGGACTATTAAGAGGATGGATACTGTGGGGGAGAAACAAGTACAAAAGGATGATTATGATCCAGAGAAATTGGAGCCGTCCCCCATTCAGGAAGAATACGCTCCTGTCATCTTTGCAGAGGATACACTTTCACATGTGATTTCTGTTGATGTGCTTTCTGGAAAGGAAGATCGTGAGAATGTGGTGCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACCACACCCTTCAGGCTGCTCAAAACAAATCGTCTAGGGGTTATCCTGACATTTGCTGTCTATAAGAGAGATCTCCCATCAAATGCAACCCCAAATGAAAGGATTCAAGCAACAAATGGGTATCTCGGTGGAGTCTTTGATGTCGAGTCATTAGTGGAGAAATTACTTCAGCAACTTGCTAGCAAGCAAACTGTAATCATTAATGTTTATGACATAACAAATCACACCCATCCGATTGCCATGTATGGTTCAAATGCTTCAGGGGATACATTCTATCATGTCAGCACTCTTAACTTTGGAGACCCTTTCAGGAAGCATGAGATGTACTGCAGGTTCAAACAGAATCCACCGTGGCCATGGTTGTCAATAACTACTTCAATTGGCATCCTTGTCATTGCACTCCTTGTTGGACATATTTTCCATGCCACTGTGAATCGAATTGCCAAAGTAGAAGATGATTACCATGAGATGATGGAGCTTAAAAAACGAGCTGAGGCAGCTGATGTAGCAAAATCCCAGTTTCTTGCGACTGTTTCCCACGAGATCAGAACACCAATGAATGGCGTTTTAGGGATGTTGCATATGCTTATGGACACAGATCTAGATGTTACCCAGCAGGAATTTGTCAGAACTGCTCAGGGCAGTGGAAAAGCTCTTGTGTCACTTATAAATGAAGTTCTGGACCAGGCAAAGATTGAAGCTGGTAAGATAGAGCTTGAAGTTGTGCTCTTTGACTTACGTGCAATTTTGGATGATGTATTGTCACTATTTTCTGAGAAGTCTCAAGAAAAAGGAGTAGAGTTGGGAGTTTATGTATCAGATCAGGTTCCTGAGCTACTAATAGGTGATCCAGGAAGATTTCGACAAATAATTACTAATCTCATGGGTAACTCAATTAAGTTCATGGACAAGGGGCATATTTTTGTCACTATTCATCTTGTTGAGGAGGTTGTGCATTCAATAGAAGTTGACAAGGAATCAACCTCAGAAAATACATTGAGTGGTTTCCCAGTAGCTGATAGTCGCCGAAGCTGGGAAGGATTCAAGGCTTTCAGTCAAGAGGGACCTCTTGGTTCTTTCTCATCTTCCTCCGGCGATCTCATCAACTTGATTGTATCTGTTGAGGATACAGGTGAAGGTATTCCTCTAGAAGCTCAGCCCCACATCTTCACTCCGTTCATGCAGGTAGGTCCATCCATCTCCCGCAAACACGGGGGAACAGGTATTGGCCTAAGCATTAGCAAGTGTTTGGTTCACCTCATGAATGGGGAAATTGGATTTGTGAGCATACCAAAGATTGGGTCAACTTTCACATTCACTGCAATCTTCACAAATGGACTCCCGAGTTCAAACGAGTGTAAAACTCAGCAAATCATCAACCAGCCTCACCCTGCATCCTCAGAATTTAAGGGCATGACTGCAATGATTATTGACCACAGACCCGTTAGAGCAAAAGTGTCAAGATATCACATTCAAAGGCTTGGTATTCATGTTGAAATGGTTTCAGATTTAAATCAAGGTTTGTCGAATGTGGCCAATGCGAATATTGTTATTAATATGATCCTCATTGAGCAGGAGGTCTGGGATAGAGATTCAGGCATGTCGTCTCACTTTGTCGATAACATATGCAAAATTGTTCATGTGGTTCCGCCAAAGATGTTTATTCTTGTTAAATCCACTCGTTCTAGAGCGAGTGCTGTAATATCCAGTGTTCATGATCCCACTGTCATCACAAAACCTCTGAGAGCAAGTATGCTTGCAGCCTCACTACAACGTTCGATGGGTTTTCAGAACAAGGGGACTCATAGAAATAGTGATCTCCCAAGTTTGTCTCTTCGCCATCTTCTTCGTGGGAGAAGAATTTTAATTGTTGATGACAATAGTGTGAACCGCATGGTAGCGGCTGCTGCTTTGAAAAAGTATGGAGCCGAGGTGGTTTGTGTCAGTAGTGGAAAAGAGGCCATCTCTTCACTGAAGCCACCCCATCAGTTTGATGCCTGTTTCATGGATATTCAAATGCCAGAAATAGATGGGTTTGAAGCTACAAGGACTATTCGGGACATGGAACTTAGCGTGAACAGCGAAATGTCTGTGTATGACATTGACAATGTTTCAAACTGGCATGTGCCAATTCTAGCTATGACAGCAGATGTTATCCAGGCAACACAAGAGGCATGCCTGAGGTGTGGCATGGATGGATATGTTTCTAAACCATTTGAAGCCGAACAGCTATATATAGAAGTTTCACGGTTTTTCCAGTCATCTTGA 3093 0.4277 MSLLHVVGYGLKVGHPLLVLCCWLVSVLYLNWFFSSGTMDTKMSFLGDGGGKSMWLKWWEKIYGCNIHQHYYQYIWSQKVKRTLWKKLLVSWVVGWTMMSLWIFCSMSLQATEKRKETLSSMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQKLQRTFAKYTERTAFERPLTSLAYAVRVLRSEREQFEKQQGWTIKRMDTVGEKQVQKDDYDPEKLEPSPIQEEYAPVIFAEDTLSHVISVDVLSGKEDRENVVRARESGKGVLTTPFRLLKTNRLGVILTFAVYKRDLPSNATPNERIQATNGYLGGVFDVESLVEKLLQQLASKQTVIINVYDITNHTHPIAMYGSNASGDTFYHVSTLNFGDPFRKHEMYCRFKQNPPWPWLSITTSIGILVIALLVGHIFHATVNRIAKVEDDYHEMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEFVRTAQGSGKALVSLINEVLDQAKIEAGKIELEVVLFDLRAILDDVLSLFSEKSQEKGVELGVYVSDQVPELLIGDPGRFRQIITNLMGNSIKFMDKGHIFVTIHLVEEVVHSIEVDKESTSENTLSGFPVADSRRSWEGFKAFSQEGPLGSFSSSSGDLINLIVSVEDTGEGIPLEAQPHIFTPFMQVGPSISRKHGGTGIGLSISKCLVHLMNGEIGFVSIPKIGSTFTFTAIFTNGLPSSNECKTQQIINQPHPASSEFKGMTAMIIDHRPVRAKVSRYHIQRLGIHVEMVSDLNQGLSNVANANIVINMILIEQEVWDRDSGMSSHFVDNICKIVHVVPPKMFILVKSTRSRASAVISSVHDPTVITKPLRASMLAASLQRSMGFQNKGTHRNSDLPSLSLRHLLRGRRILIVDDNSVNRMVAAAALKKYGAEVVCVSSGKEAISSLKPPHQFDACFMDIQMPEIDGFEATRTIRDMELSVNSEMSVYDIDNVSNWHVPILAMTADVIQATQEACLRCGMDGYVSKPFEAEQLYIEVSRFFQSS 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1143 1030 SMART HKATPase_4 557 720 IPR003594 -
Lal14g1143 1030 Pfam CHASE domain 165 357 IPR006189 -
Lal14g1143 1030 Gene3D - 509 720 IPR036890 -
Lal14g1143 1030 PRINTS Bacterial sensor protein C-terminal signature 645 659 IPR004358 GO:0016310|GO:0016772
Lal14g1143 1030 PRINTS Bacterial sensor protein C-terminal signature 663 673 IPR004358 GO:0016310|GO:0016772
Lal14g1143 1030 PRINTS Bacterial sensor protein C-terminal signature 680 698 IPR004358 GO:0016310|GO:0016772
Lal14g1143 1030 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 430 511 IPR036097 GO:0000155|GO:0007165
Lal14g1143 1030 ProSiteProfiles Histidine kinase domain profile. 452 720 IPR005467 -
Lal14g1143 1030 ProSiteProfiles CHASE domain profile. 159 384 IPR006189 -
Lal14g1143 1030 CDD PRTases_typeI 839 923 IPR000836 -
Lal14g1143 1030 CDD HisKA 445 506 IPR003661 GO:0000155|GO:0007165
Lal14g1143 1030 ProSiteProfiles Response regulatory domain profile. 895 1027 IPR001789 GO:0000160
Lal14g1143 1030 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 716 IPR003594 -
Lal14g1143 1030 Gene3D - 889 1030 - -
Lal14g1143 1030 SMART HisKA_10 445 510 IPR003661 GO:0000155|GO:0007165
Lal14g1143 1030 SMART REC_2 894 1023 IPR001789 GO:0000160
Lal14g1143 1030 Pfam Response regulator receiver domain 896 1020 IPR001789 GO:0000160
Lal14g1143 1030 PANTHER TWO-COMPONENT HISTIDINE KINASE 56 1029 - -
Lal14g1143 1030 SMART CHASE_2 159 359 IPR006189 -
Lal14g1143 1030 Coils Coil 422 442 - -
Lal14g1143 1030 Pfam His Kinase A (phospho-acceptor) domain 445 510 IPR003661 GO:0000155|GO:0007165
Lal14g1143 1030 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 499 715 IPR036890 -
Lal14g1143 1030 SUPERFAMILY CheY-like 743 870 IPR011006 -
Lal14g1143 1030 SUPERFAMILY CheY-like 891 1026 IPR011006 -
Lal14g1143 1030 Gene3D - 413 508 - -
Lal14g1143 1030 PANTHER HISTIDINE KINASE 3 56 1029 - -
Lal14g1143 1030 Gene3D CHASE domain 164 391 IPR042240 -
Lal14g1143 1030 Gene3D - 107 159 - -
Lal14g1143 1030 CDD HATPase_EvgS-ArcB-TorS-like 562 718 - -
Lal14g1143 1030 CDD REC_hyHK_CKI1_RcsC-like 896 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1143 Lal-Chr14 13579696 13586493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1143 1 1029 Miscellaneous Gene Families AT1G27320 66.223 0.0 1367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal14g1143 CHASE 2e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1143 K14489 - gmx:100801546 1689.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1143 14 13579696 13586493 Lal7g0627 7 13255756 13262965 LSH