Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1139 ATGGATTGCAATGCAAAATCTCCCTCACAGTGGGATTGGGAGCATCCACTCTTACTCAATGCAAAAGCAACTGAAATTTCCAAATCGCCACCACCAAATTGGAATGGTGAAACAAACCGAGAGATCAATGTTAGGTTGTTGGATACATCTTTCGGCAGTGGTTGTTCTGGGTCTGAGCTAATACATGCTTCATCAAGGAGCTCAATATCAGCTTCCATAAATTCATCATCAAATAGGGATAGCAAAACATCTATGTACACTTTTGAAACTTCCCTTGATGATTCCAGTGGTAAAAGAGAATTGTCTAAAGTTGAAATTTATCATGGACTAGAGCCCTCATCTGCCTCTGGTGAACCACTGCTCTCTCTGAAACTTGGTAAGCGGCTGTACTTTGAAGATGTCTACCCCGGAAATATTTCAAAGAGCCCGTCTTTTTCTGGGGCTCCTATATCATCTATGAGTATTGGTAAAAAATGCAAGTCCAATGGTGAGAATGTACAATTTCCACGCTGCCAGGTTGAAGGCTGTGGCCTTGATCTCTCATCAGCAAAAGATTACCATTGCAAACATAGAGTTTGTGACAGTCATTCCAAATCCCCTAAGGTGCTAATAGCTGGTATGGTGTGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGGTCTGTCAGAGTTTGATGAGAAAAAGAGAAGCTGCAGACGACGCCTTTCAGATCACAATGCAAGGCGCCGTAAACCTCATCCAGTAGCCACCCGATTAAACCAACCATCATCACCCTATGATATGAGGCAACATATGAGCTCTTTGGCTTATTCAAGGACTGCTACAAATTTAGCTTGGCAAGATACACACAGCAGCAAGCTCCCCCAGACAAAAGATTTTCTCTTGAATCCTGCCAAAGCCAATAATGAGATACCAAATATTAGCACTATGATGTCTTATGATTTCAACCCCCCTTTTACACTCAAAGGCATTGCAACCAGGAGTGCTAATCCAGACTTAGAAGACTCGATTACCTCCTCTGATCATAATGTTACACAAGATTTTCACCGTGCTCTCTCTCTTCTGTCAACCAACTCCTGGGGGAGTTCACATGAGCACAAGCTCATTTCTGAAGAACCACCCAACAACGCAATCATAACCGGTCAGCCTGTAACACATGCTATGAGTCAGTGCTTACCTCCAGAATATTGGCATATTGGTCAACAACCAGTGAATTCCAGCATGTGGATCTCCTACTCAAATTGTGACGATAGCAATCGCTTCCAAGAATTTCAACTGTTCAGAGAACCTTATGAGTCTGGTTTTCCTCACAACCAGATGGGTTAA 1326 0.4291 MDCNAKSPSQWDWEHPLLLNAKATEISKSPPPNWNGETNREINVRLLDTSFGSGCSGSELIHASSRSSISASINSSSNRDSKTSMYTFETSLDDSSGKRELSKVEIYHGLEPSSASGEPLLSLKLGKRLYFEDVYPGNISKSPSFSGAPISSMSIGKKCKSNGENVQFPRCQVEGCGLDLSSAKDYHCKHRVCDSHSKSPKVLIAGMVCRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPHPVATRLNQPSSPYDMRQHMSSLAYSRTATNLAWQDTHSSKLPQTKDFLLNPAKANNEIPNISTMMSYDFNPPFTLKGIATRSANPDLEDSITSSDHNVTQDFHRALSLLSTNSWGSSHEHKLISEEPPNNAIITGQPVTHAMSQCLPPEYWHIGQQPVNSSMWISYSNCDDSNRFQEFQLFREPYESGFPHNQMG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1139 441 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 21 440 IPR044817 GO:0003677
Lal14g1139 441 SUPERFAMILY SBT domain 169 247 IPR036893 GO:0003677|GO:0005634
Lal14g1139 441 MobiDBLite consensus disorder prediction 235 259 - -
Lal14g1139 441 Gene3D - 162 232 IPR036893 GO:0003677|GO:0005634
Lal14g1139 441 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 21 440 - -
Lal14g1139 441 Pfam SBP domain 171 244 IPR004333 GO:0003677
Lal14g1139 441 ProSiteProfiles Zinc finger SBP-type profile. 168 245 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1139 Lal-Chr14 13546778 13554626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1139 1 359 SBP-box Gene Family AT1G27360 39.678 3.83e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal14g1139 SBP 3.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1139 - - gmx:100796013 457.988