Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1129 ATGTCTCTAAGTATCAACAACATGGAAAATGGTTGCTTTTCTTCTTCTCCATGTCGTGATGCTAATTTTCCAGCTGGTTTGAGAGTTCTAGTTGTTGATGATGATCCAACATGGCTCAGGATCCTTGAAAAGATGCTCAGGAAGTGTTCTTATGAAGTGACTACATGTTGTTTAGCAACAGAGGCCCTAAAAAAGCTTCGCAACAGGAAAGATGTGTATGACATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTCAAACTTCTTGAGCAAATTGGACTTGAGATGGATCTTCCTCTCATCATGATGTCGGTCGATGGAGAAACAAGCAGGGTGATGAAGGGAGTTCAACATGGAGCATGTGATTATCTCCTTAAGCCTATAAGGATGAAAGAACTGCGAAACATATGGCAACATGTCCTCAGAAAAAGGATACATGAGGCAAGAGAATTTGAAAGTAGTGAGAGTTTTGATCATTTGATGAGAAATGGATCAGATCAATCTGATGATGGAAACCTCTTTGCTTTAGAAGATATGACCTCAATGAAGAAAAGGAAAGATATAGATAATAAACATGATGACATAGAGTTTGGAGATTCATCATCAACAAAGAAGGCTAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAGTTTGTTAAAGCAGTGAATCAGATTGGATTTGATAAAGTTGGTCCCAAGAAAATTCTTGATTTGATGAATGTTCCATGGCTGACTAGAGAAAATGTTGCTAGTCACTTGCAGAAATACCGACTCTACTTGAGTAGGTTGCAGAAGGACAACAATCAGAAATCAACAAGTGGAATAAAGCATTCAGACTTACCTTCAAAAGAGCCAGCAAGTTTTACTTTTCACAACTCCTTAACCAAGCAACAAAATGATATTGAAATTGACAGCTTCGGTTACTCAGATGGAACATTACAACTTCAGAACATGGCTGCTACAAGTCATGAAGGTGATCTCAAGGGAATTGTGTTGGAGCCTGCAACAGAAAAGGGAAGAGCTTTGAATAGTAACATTCCTGATCCAAACATAACAAAGAGTTCTCAGATTGGCCTTAATCAATCTTTTGGACCTCTCAAGCCAGAAGGAAATCATGCAATATTTGATTGCACCATACCATCAAAGTACTCTTGGAATGAAGTTCCGAAAAGGATACTCAAAGAAGAACAAAAGTCACTTGTTAAATTTGAGGATAGCTTTAGCCAGTTAGAGATACATGGAGGCACACAGCATCACATCCATGTTGATCAATCTCAATCAATGGCTTCAATGAATTCCGATCCACCTATAACCGAAAAAGAGGTTGTTGCCTGTTTAGAAACCAAACCTTTGTATGCTGATTACAAAAGTGACTATGCCATTTGTGAATGTTCTATAGGGCCTGCAGTTGACACCTTTCCTACTCAGTCTAAAAGCCTTATGGTGAATGGTCAATCTTCAGAACCCATTTTCACATCAAATTTGGGTTTCAAAACACCGGAATGGAATCTCAGTCACATGTCAGATCTGGACTTTTACCAAAGAAACTTACTTTTGGGTGGCGAGGTAGCAGCCTATGAACCTTTGGAGGATGAATTGCATCTCATTTTACTACAAGGCGAATACTATAATATGAACTTTGGAATGCAGAATATAGAGATGCCAGAGTATTATGAGCCAGGGTTTACTGCTGAACTTCCAACACGCTTACGCGATTCTGCAGATTATTCAGTGATAGATCAAAGTCTATTCATAGCATGA 1767 0.3894 MSLSINNMENGCFSSSPCRDANFPAGLRVLVVDDDPTWLRILEKMLRKCSYEVTTCCLATEALKKLRNRKDVYDIVISDVNMPDMDGFKLLEQIGLEMDLPLIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRIHEAREFESSESFDHLMRNGSDQSDDGNLFALEDMTSMKKRKDIDNKHDDIEFGDSSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKDNNQKSTSGIKHSDLPSKEPASFTFHNSLTKQQNDIEIDSFGYSDGTLQLQNMAATSHEGDLKGIVLEPATEKGRALNSNIPDPNITKSSQIGLNQSFGPLKPEGNHAIFDCTIPSKYSWNEVPKRILKEEQKSLVKFEDSFSQLEIHGGTQHHIHVDQSQSMASMNSDPPITEKEVVACLETKPLYADYKSDYAICECSIGPAVDTFPTQSKSLMVNGQSSEPIFTSNLGFKTPEWNLSHMSDLDFYQRNLLLGGEVAAYEPLEDELHLILLQGEYYNMNFGMQNIEMPEYYEPGFTAELPTRLRDSADYSVIDQSLFIA 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1129 588 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 563 IPR045279 GO:0009736
Lal14g1129 588 Pfam Myb-like DNA-binding domain 209 259 IPR001005 -
Lal14g1129 588 SMART REC_2 27 139 IPR001789 GO:0000160
Lal14g1129 588 SUPERFAMILY CheY-like 26 151 IPR011006 -
Lal14g1129 588 Pfam Response regulator receiver domain 29 138 IPR001789 GO:0000160
Lal14g1129 588 Gene3D - 203 266 - -
Lal14g1129 588 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 563 - -
Lal14g1129 588 SUPERFAMILY Homeodomain-like 205 264 IPR009057 -
Lal14g1129 588 CDD REC_typeB_ARR-like 29 143 - -
Lal14g1129 588 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 207 260 IPR006447 GO:0003677
Lal14g1129 588 Gene3D - 27 195 - -
Lal14g1129 588 ProSiteProfiles Response regulatory domain profile. 28 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1129 Lal-Chr14 13396970 13402130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1129 23 273 Response Regulator Gene Family AT2G25180 56.693 1.47e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Lal14g1129 Response_reg 9.4e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1129 - K14491 lang:109363016 1099.35