Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1121 ATGGCCATGTTGGATGCAGTGTTGGGAATTGTCAATGTGGCATTCTTTTATGCAATTCTGATTTGGGTTTTGGTTGATAGTTTGAGACAAAGCAAGAAAAACAATATTGCATATCTTAAACAAGGACCAAAGTTGTTAGCCACAATTACTGTTCTATGCAATGTTGTTATTTCAGTTATGAACATAGCTTTTGCTTTTCATGAATATAGGATTAAGAGAATCATAGGATATAACTCTCTTTCCTTGACTCTAACATGGGTCTTGTCAACTATAGTCTCATTTTATTCAATGAAAAGAAGAACAATTAACCAAAGGTTCCCCCTTGTTCTAAATTTATGGTGGAGTTTCACCACAATCATAGTTGCACTCTCAGTTTCTATTGAAATAGTGAACAATTTTGAGTCCTTGAACTTGTGGTTTTTCCTGTTGGAGGATAACATATTTGGTATGGTTTCCTTGCCCATGTTGTTTCTTGTATGTTTCAATGCACTTCCCTATGTATTATGTGCAAGGGAACAACAACATAGTGATAGCTACATGGAACAAAGGTTAGTTCAACAAGAGATGGAAGCAGAAGATAAAGAGGCATTCACAAATGCAAACATATGGAGCCAACTCACATTCCAATGGCTGAACCCCATTTTTAACAAAGGTAGAATTCAGAAACTTGAACATGGTCACATTCCTTCTGTTCCTCATTCTGAAACTGCAGAAAATGCTTCTTCCATGTTGGAAGAATCGCTTCGCAAACAGAAACTTGAAGGGGGTTCCTTGACAAAAGCTATTGCCCATTCTATCTGGAAATCCTTGGCTTTAAATGCAATTTTTGCAGGTGTTAACACAATTGCCTCTTATATGGGCCCATTGTTGATTACAAACTTTACTGTGGAGTCATTAAGTCAAAGACAATGGTACTTTGGTGCTCAACGAATCGGAATCCGCGTGCGTGCTGCTCTAATGGCTCTAGTTTACAGCAAGTCCTTATCGATGAAGAGTGTTGGACCAACACATGGTAAAGTCATAAATTTGATCAATGTGGATGTTGAAAGAACCGGAGACTTCTTCTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAAGTCATTTTGGCCTTGGTGATCTTATGCATAAATTTGGGTTATACCCCTTCCATTGCTGCATTTGTTGTCACCATTTTGGTCATGGTCTGTAATACACCTTTGGCAAATATGCAAGAAAATCTCCACTCCAAAATCATGGAAGCTAAGGACTCAAGAATCAAAGTGACTTCAGAGACCATGAAGAACATGAGGATCCTAAAATTGCATTCATGGGAATCCACATTCTTACAAAAACTCCTCGAACTCAGGGACACTGAGAGTAAGTGGCTGCAGAAATATCTATATATATGCTCAGCAATAGCGACTTTGTTTTGGGCATCTCCAACTTTAGTTTCTGTTGTCACCTTTGGTGCATGTATATTGGTGAAAACAGAACTTACAGCAGCCACAGTCCTTTCAGCTTTAGCGACTTTTCGGATTCTACAAGATCCAATCTACAACCTACCTGAGCTTATTTCCATGATAGCTCAAACAAAAGTCTCGGTTGATCGAATCCAGGAGTTCATTAAGGCAGAGGATCAGAACCAATTCAAGAATAATCATGCTTCAAACACTTCACCAATTGCTATTGAAATCAGGCCAGGTGAATATGCATGGGATACAAATGATCAAGCTCCCAAGAAACCAACAATTCAAATTACAGAAAAAATGATGATAAAGAAAGGTCAGAAAGTTGCAGTGTGTGGATCAGTGGGGTCTGGCAAATCAAGCTTACTTTGCTGTATGCTTGGTGAGGTTCCATTTTCTGGGGCATCGATCAAACTCTATGGTACTAAAAGTTATGTACCTCAGAGTCCTTGGATTCAGTCTAGAACTATTAGAGAAAATATCTTGTTTGGCAAGAAAATGAATAAGGACTTCTATGAAAATGTTTTGGATGTCTGTGCTTTGCATCAGGATATAAACATGTGGGTTGATGGAGATTTGACCCCGGTGGAGGAGAGGGGCTTAAACTTAAGTGGAGGGCAGAAACAGCGGATTCAACTTGCAAGGGCTGTTTACAATGATTCAGATATTTATTTCCTCGATGATCCTTTCAGTGCTGTTGATGCTCATACTGGAACTCATTTGTTTAAGAAATGTCTTAAGCAATTTTTTTCTGAGAAAACAGTTGTTTATGCTACTCATCAACTGGAATTCTTGGAAGCTGCAGATATCGTTTTAGTAATGAAAGACGGTAAAATAGTGGAATCAGTAAGGTATGAATATCTCATGGCGTGTTCTAATAGTGAACTTGTTCAACAAATGGCTGCTCATGAAGAAACGGTGAACCAAAAAAATCCGCTCCAAGAAGAAGATTATGTTACCAGCATACCCTGCCAGAAAAATCAAATTGAAGTTGCTGGAGAAATTTTTCATGAGTCAATCAAGGATTGGAAGAGAAGCAAAGAAGAGGAAGCAGAGACGGGACGAGTGAAATGGAGTGTTTACTCAACTTTTGTCACGTGTGCTTATAAAGGCGCACTTGTTCCAGTTATAATTGTCTGCCAAATTCTTTTTCAAGTTTTGCAGATGGGAAGCAATTATTGGATTTCTTGGGCCTCAGAACAGGACAGTATCAGCAAAGGGAACCTAATGAGAACATTTACGTTTCTATCGAGTGGCAGCTCCATCTTCGTCCTGGGAAGGACTGTTTTGATGGCAAAAGTTTCCATCAAGACTGCTCAGCGCCTTTTTCATGGAATGATTACATCGGTGTTCAGCGCACCTGTTTCATTTTTTGATACAACACCTTCAAGCCGAATCCTAAGTAGGTCATCGACGGATCAAAGTACAGTAGACACAGACATATCATACAGATTGGCTGGACTAGTATTTGCACTTATCCAGTTGTTGAGTATCATCATGCTAATGTCTCAAGCTTCCTGGCAAGTCATTCTCCTCTTTCTTGTCGTGTTTGCTATCTCGATCTGGTATCAGGCTTATTACATAACTTCAGCTAGGGAATTGGCTAGGATGGTTGGAATGCGAAAGGCTCCTATCTTACATCACTTCTCAGAATCAATTGCCGGGGTTGCTACAATCCGTTGTTTTAATCAAGAGAAAATGTTCATTGACAAGGTTAAGGCTCTAATTGATGATTATTCCAAGGTAGCCTTTCACAATGATGCCACAATGGAATGGTTGTCGGTCCGAATCAATTTTCTCTTCAATCTGGTCTACTATTTTGTTCTGATCATCTTGGTTACTCTGCCAAGGTCTGCCATTGATCCCAGCTTGGCAGGTCTAGTGGCTACCTATGGTTTGAATTTGAGTGTCCTTCAAGCTTGGGTAATATGGAATCTCTGCAATGTTGAGAACAAAATGATATCAGTTGAGAGGATATTACAATTCTCTAGTATACCAAGTGAAGCACCATTAGTAATTCAAGACTGCAGGCCTGAACCTGAGTGGCCAAGGGACGGAAAAATCGAGCTTCTTAACCTTCATATACAGTATGATCCTGCAGCTCCTATGATTCTCAAAGGTATCACTTGCACCTTCCCAGGACAAAAGAAGATTGGAGTAGTAGGCAGGACAGGCAGTGGAAAATCTACATTGGTGCAAGCTCTCTTTCGAGTCGTGGAGCCTTTGAAAGGATGGATACTTATTGATGGTGTACATATTTCGAAGATCGGCTTGCACGATTTGAGATCGAAACTTGGTATAATTCCTCAGGATCCAACCTTGTTTCTAGTGGCTGAGAATGGAGAAAATTGGAGTGTTGGACAAAGGCAACTAGTTTGTCTGGCTAGGCTGCTATTGAAGAAAAGAAGAATTTTGGTTCTTGATGAAGCAACTGCATCTATTGACACTGCAACTGATAACTTAATTCAGAAGACTATTAGGGAAGAAACAAGTGGATGCACAGTCATATCTGTAGCACATAGAATTCCTACAGTAATTGATAATGACTTTGGTTTTGGTCCTTCATGA 4017 0.3968 MAMLDAVLGIVNVAFFYAILIWVLVDSLRQSKKNNIAYLKQGPKLLATITVLCNVVISVMNIAFAFHEYRIKRIIGYNSLSLTLTWVLSTIVSFYSMKRRTINQRFPLVLNLWWSFTTIIVALSVSIEIVNNFESLNLWFFLLEDNIFGMVSLPMLFLVCFNALPYVLCAREQQHSDSYMEQRLVQQEMEAEDKEAFTNANIWSQLTFQWLNPIFNKGRIQKLEHGHIPSVPHSETAENASSMLEESLRKQKLEGGSLTKAIAHSIWKSLALNAIFAGVNTIASYMGPLLITNFTVESLSQRQWYFGAQRIGIRVRAALMALVYSKSLSMKSVGPTHGKVINLINVDVERTGDFFWYIHGVWLLPVQVILALVILCINLGYTPSIAAFVVTILVMVCNTPLANMQENLHSKIMEAKDSRIKVTSETMKNMRILKLHSWESTFLQKLLELRDTESKWLQKYLYICSAIATLFWASPTLVSVVTFGACILVKTELTAATVLSALATFRILQDPIYNLPELISMIAQTKVSVDRIQEFIKAEDQNQFKNNHASNTSPIAIEIRPGEYAWDTNDQAPKKPTIQITEKMMIKKGQKVAVCGSVGSGKSSLLCCMLGEVPFSGASIKLYGTKSYVPQSPWIQSRTIRENILFGKKMNKDFYENVLDVCALHQDINMWVDGDLTPVEERGLNLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLKQFFSEKTVVYATHQLEFLEAADIVLVMKDGKIVESVRYEYLMACSNSELVQQMAAHEETVNQKNPLQEEDYVTSIPCQKNQIEVAGEIFHESIKDWKRSKEEEAETGRVKWSVYSTFVTCAYKGALVPVIIVCQILFQVLQMGSNYWISWASEQDSISKGNLMRTFTFLSSGSSIFVLGRTVLMAKVSIKTAQRLFHGMITSVFSAPVSFFDTTPSSRILSRSSTDQSTVDTDISYRLAGLVFALIQLLSIIMLMSQASWQVILLFLVVFAISIWYQAYYITSARELARMVGMRKAPILHHFSESIAGVATIRCFNQEKMFIDKVKALIDDYSKVAFHNDATMEWLSVRINFLFNLVYYFVLIILVTLPRSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLVIQDCRPEPEWPRDGKIELLNLHIQYDPAAPMILKGITCTFPGQKKIGVVGRTGSGKSTLVQALFRVVEPLKGWILIDGVHISKIGLHDLRSKLGIIPQDPTLFLVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSGCTVISVAHRIPTVIDNDFGFGPS 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1121 1338 SUPERFAMILY ABC transporter transmembrane region 265 532 IPR036640 GO:0005524|GO:0016021
Lal14g1121 1338 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 559 784 IPR003439 GO:0005524
Lal14g1121 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1163 1332 IPR027417 -
Lal14g1121 1338 Pfam ABC transporter transmembrane region 277 511 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal14g1121 1338 Pfam ABC transporter transmembrane region 861 1098 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal14g1121 1338 CDD ABCC_MRP_domain1 557 761 - -
Lal14g1121 1338 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 107 1258 - -
Lal14g1121 1338 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1261 1333 - -
Lal14g1121 1338 CDD ABC_6TM_ABCC_D2 857 1146 IPR044726 GO:0140359
Lal14g1121 1338 SUPERFAMILY ABC transporter transmembrane region 858 1151 IPR036640 GO:0005524|GO:0016021
Lal14g1121 1338 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 859 1134 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal14g1121 1338 CDD ABC_6TM_ABCC_D1 272 532 IPR044746 GO:0140359
Lal14g1121 1338 Gene3D - 583 811 IPR027417 -
Lal14g1121 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 583 775 IPR027417 -
Lal14g1121 1338 Gene3D - 1260 1333 IPR027417 -
Lal14g1121 1338 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 269 524 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal14g1121 1338 Gene3D - 1154 1259 IPR027417 -
Lal14g1121 1338 ProSitePatterns ABC transporters family signature. 686 700 IPR017871 GO:0005524
Lal14g1121 1338 PANTHER OS01G0902100 PROTEIN 1261 1333 - -
Lal14g1121 1338 PANTHER OS01G0902100 PROTEIN 107 1258 - -
Lal14g1121 1338 SMART AAA_5 588 761 IPR003593 -
Lal14g1121 1338 SMART AAA_5 1197 1335 IPR003593 -
Lal14g1121 1338 Pfam ABC transporter 1188 1266 IPR003439 GO:0005524
Lal14g1121 1338 Pfam ABC transporter 584 713 IPR003439 GO:0005524
Lal14g1121 1338 Gene3D ABC transporter type 1, transmembrane domain 821 1152 IPR036640 GO:0005524|GO:0016021
Lal14g1121 1338 Gene3D ABC transporter type 1, transmembrane domain 257 542 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1121 Lal-Chr14 13340520 13346146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1121 573 791 Calmodulin-binding Proteins AT2G36910 30.833 5.62e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1121 - - adu:107481980 2039.23