Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1080 ATGGACAAACCCCATAGTTTTCTTCATAGTCTTGTCAAACACTTCAAATTTGGTTCCACTAGTGGGCAAAACAATGAAGCTGACTTACAGAAAATGGCTACACAGGAACAAAAAAACTTTGCTTATGAAACCTTAGTTGTTGCAACCAAGAATTTCAATCCTACTCATAAGCTAGGTGAAGGAGGTTTTGGACCTGTCTACAAGGGGAAGCTGAATGATGGGAGAGAGATTGCAGTGAAGAAGTTGTCACAGACCTCAAATCAAGGGAAGAAAGAGTTCTTGAATGAAGCCAGGTTGTTGGCTCGTGTGCAGCATAGGAATGTGGTGAATTTGTTGGGTTATTGTGTCCATGGCATAGAAAAGTTACTTGTTTATGAGTATGTGCCACATGAGAGCCTTGACAAGCTTCTATTCACCTTGGCTCAGTTTGGTGCTGTCTTGACTTGGCCTGTGGCTGCCTGCGCAGGTCTGGCTTGTCTCGGTCATCGCCAGGCATCTGGCCTTGACAGTCTCGGTCATGCACAGGCATGTGGTGCTGGTTGGCTCGGTCATGGCCAGACATCTGGCCCTGGCTGGCTCGGTCACAATCAAGTCTCTGACTTTGGTTGGCTTGGTCACGATCATGCATCTGGCCTTGGCTGGCTCGGTCACGATCAAGTCTCTGGCCTCGGTCACGAGCATGCATCTGGCCTTGGGCTTCTCGAATCCCAGAGGAGAGATGAGCTTGATTGGAAACGTAGATTTGTAATAATCACAGGGGTGGCAAAAGGGTTGCTTTATCTTCATGAAGACTCACATAATTGCATAATACATCGTGACATAAAGGCAAGTAATATTTTACTTGATGATAAGTGGTCACCAAAAATTGCTGACTTTGGCATGGCTCGTCTCTTTCCAGAAGATCAAAGCCAAATCAATACACGTGTAGCTGGAACCAATGGATATATGGCTCCGGAGTATGTGATGAATGGGAATCTGTCTGTGAAGGCAGATGTGTTTAGCTATGGAGTTTTGGTGTTGGAGTTGATAACTGGCCAAAGAAATTCTGCGTTTAACTTAGATGTGGATGCTCAGAGTCTTCTTGATTGGGCATACAAGCAGTACAAGAAAGGAAAGAGCTTAGACATTGTAGATTCCACATTAGCATCTTCAATGGAACCTGAACAAGTAGCTATGTGCATTCAGCTGGGTTTGCTATGCACTCAAGGCGATCCACAGCTCCGTCCGAATATGCGGCGCGTGGTGATGATACTGTCTAGGAAACCTGGTCCTGGTCACATGGACGAACCAATGAGACCAGGGATACCTGGTTCCAGATATAGAAGACCTCGCAGACACTCTGCAATGTCTTCTACGTCTGATTCGCATACTTTGGATTCAAGCAACAATTGTACCACTCGTACCACTACTGCTACAGGAACAAACTCTGCTACCAATACTATAGAAAGAATAGATTCCAAAGGGAAACGTCCAATGCAGGGTTAG 1485 0.4559 MDKPHSFLHSLVKHFKFGSTSGQNNEADLQKMATQEQKNFAYETLVVATKNFNPTHKLGEGGFGPVYKGKLNDGREIAVKKLSQTSNQGKKEFLNEARLLARVQHRNVVNLLGYCVHGIEKLLVYEYVPHESLDKLLFTLAQFGAVLTWPVAACAGLACLGHRQASGLDSLGHAQACGAGWLGHGQTSGPGWLGHNQVSDFGWLGHDHASGLGWLGHDQVSGLGHEHASGLGLLESQRRDELDWKRRFVIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWSPKIADFGMARLFPEDQSQINTRVAGTNGYMAPEYVMNGNLSVKADVFSYGVLVLELITGQRNSAFNLDVDAQSLLDWAYKQYKKGKSLDIVDSTLASSMEPEQVAMCIQLGLLCTQGDPQLRPNMRRVVMILSRKPGPGHMDEPMRPGIPGSRYRRPRRHSAMSSTSDSHTLDSSNNCTTRTTTATGTNSATNTIERIDSKGKRPMQG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1080 494 MobiDBLite consensus disorder prediction 420 494 - -
Lal14g1080 494 SMART serkin_6 52 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1080 494 SUPERFAMILY Protein kinase-like (PK-like) 37 419 IPR011009 -
Lal14g1080 494 Gene3D Transferase(Phosphotransferase) domain 1 231 423 - -
Lal14g1080 494 Gene3D Phosphorylase Kinase; domain 1 15 127 - -
Lal14g1080 494 ProSiteProfiles Protein kinase domain profile. 52 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g1080 494 PANTHER RECEPTOR-LIKE KINASE 3 475 - -
Lal14g1080 494 Pfam Protein tyrosine and serine/threonine kinase 55 417 IPR001245 GO:0004672|GO:0006468
Lal14g1080 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Lal14g1080 494 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 475 - -
Lal14g1080 494 MobiDBLite consensus disorder prediction 450 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1080 Lal-Chr14 12991106 12996459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1080 233 435 Receptor kinase-like Gene Family AT4G11530 49.756 2.51e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal14g1080 PK_Tyr_Ser-Thr 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1080 - - gmx:100795769 411.764