Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1077 ATGATAACTCCAAACTTGAACTTGGAACCTGAAAATAATTCAGAAGATAGCAGCCAAGTAGCTTCTAATATATCCTTGCAAGGAACACCCTATGATCATAATCTTAAGAAGGAAAGTACCACCAGTTATTCATGTCTTACAAATCTCACCAAGGCTGAAGCTGATCCAGCTTCTATGAACCTTGATTTGACACTCAACTTTAACTCAAGTGATGGTAAGTTTAAAGGTACAAGTGATGCTAGCGGTGAAGTAGGAGCTGAAGCATTAGCATCGGCGTCAGCGACAGCAACTCCTCGAGTTTTTTCTTGTAACTACTGCAGGAGAAAATTCTTTAGCTCACAGGCCTTAGGGGGTCATCAGAATGCACATAAAAGGGAGAGGACAATGGCGAAGCGTGCAATGAGAATGGGAATGTTCAGTGAGAGGTATACAAGCTTAGCATCTCTACCACTTAACGGTTCGCCTTTTCGATCTCATGGTATTGAAGCTCATTCTGCAATGCACCATACACATATGCAAATGCCATCATCACTACTAAGGGCTGATGCAAAGTTTGAGAGAAACCATTTTGGATCACCAATTTTCATGGAAGATAATGATGTTAGTCTTTTTTGGCCTGGTAGTTTCAGAAGAGTGAACCAAGGAACTAGTAGTAGTGTTAATCTTGGACATGCTCAAACTTATAGTACTAGTTTTATCCCAATGGCACCTCCTCCATCACAAATATCTTCATCTCCAGATCTTACTCTGAAGCTTTAA 759 0.4058 MITPNLNLEPENNSEDSSQVASNISLQGTPYDHNLKKESTTSYSCLTNLTKAEADPASMNLDLTLNFNSSDGKFKGTSDASGEVGAEALASASATATPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFSERYTSLASLPLNGSPFRSHGIEAHSAMHHTHMQMPSSLLRADAKFERNHFGSPIFMEDNDVSLFWPGSFRRVNQGTSSSVNLGHAQTYSTSFIPMAPPPSQISSSPDLTLKL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1077 252 Gene3D Classic Zinc Finger 87 148 - -
Lal14g1077 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 128 IPR013087 -
Lal14g1077 252 MobiDBLite consensus disorder prediction 232 252 - -
Lal14g1077 252 ProSitePatterns Zinc finger C2H2 type domain signature. 103 123 IPR013087 -
Lal14g1077 252 MobiDBLite consensus disorder prediction 1 21 - -
Lal14g1077 252 PANTHER ZINC FINGER PROTEIN JAGGED 9 252 IPR045320 GO:0003700
Lal14g1077 252 SUPERFAMILY beta-beta-alpha zinc fingers 99 129 IPR036236 -
Lal14g1077 252 PANTHER ZINC FINGER PROTEIN 3-RELATED 9 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1077 Lal-Chr14 12970516 12971274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1077 95 252 C2H2 Transcription Factor Family AT1G66140 44.505 3.05e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1077 - - gmx:100775305 327.02