Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1052 ATGGTTTTTCCAAAACCAGCTTCTGAGTCAGATCTCTTTAATCTTAACTCTAATGTTCCTTTTCGTTATGCCACTAACTCTCTTCCTAGGTATTGCATGCCAGAGAACTCTATGCCCAAGGAATCTGCATATCAGAACATTCATGATGAGTTGCAACTTGATGCAAATCCAAAGCTGAACTTGGCTTCATTTGTTACCACATCTATGGAGGAAGAATGCAACAAGCTCATAATGGAATCCATCAACAAAAACTATGTTGACATGGATGAGTACCCTGTTACCACTGACCTTCATAATCGGTGTGTGAACATGATAGCACGATTGTTCAATGCGAAAATCGGAGAAGATGAGAGCGCAATTGGAGCAGGAACGGTTGGATCGTCCGAGGCCATAATGCTAGCAGGACTTGCGTTCAAGAAGAAATGGCAGAACAAACGCAAGGCTGAGGGCAAGCCCTATGATAAACCTAACATGGTCACTGGTGCTAATGTGCAGGTTTGTTGGGAGAAGTTTGCAAGGTATTTTGAGGTGGAATTGAGGGAAGTGAAAGTGAGGGAAGACTATTATGTCATGGACCCTGCCAAAGCTGTTGAAATGGTAGATGAGAACACTATTTGTGTGGCTGCAATATTAGGCTCTACTTATAATGGAGAATTTGAAGATGTCAAGCTCTTAAATGATCTCTTGCTAGAAAAAAACAAGCAAACTGGGTCGAGCGTGACAGGTTGGGACGGATGGGACACCCCTATTCATGTGGATGCTGCTAGTGGTGGATTTATTGCTCCTTTCCTTTATCCAGAGCTAGAATGGGATTTTAGACTCCCATTGGTGAAGAGCATAAATGTTAGCGGCCACAAATATGGCCTTGTTTATGCTGGAATTGGTTGGGTTATATGGAGGACTAAAGAAGATTTGCCACAAGACCTTGTCTTCCATATTAATTACCTTGGTGCTGACCAACCTACCTTCACTCTGAATTTTTCTAAAGGTTCTAGTCAGATTATTGCTCAATATTATCAGCTCATTCGCTTCGGCCGAGAGGGATACAAGAGTATAATGGAGAATTGCAGAGAAAATGCTAAGGTGCTGAGGGAAGGACTAGAGAAAACAGGATGTTTTAACATACTCTCAAAGGACAATGGTGTTCCTGTGGTAGCATTTTCCCTTAAGGACAGAAGTTGTCACGACGAGTTCAAGATATCGGGGATGCTGCGGCGCCACGGCTGGATCGTGCCAGCTTATCCAATGCCACCAGCCGCTCAGCACATCAATGTGCTCCGTGTGGTGGTTAGGGCCGAGTTTTCGCGCATACTTGCCGAACGCCTTGTGTTTGACATCACAAATGTGTTACAAGAACTTGAAATACTCCCCCCTAAGTACAATGCTAAAATAACCAATATTGTTAAAGAAGAGAAGGCTATAGATGATGACAATGGTGTGAAGAGGAGTGCATTGGATGCACATAGAGAAATCATTGCACAAGAATCCAATAAGCGTCACAAAATCTTGGCTGCATAG 1518 0.4321 MVFPKPASESDLFNLNSNVPFRYATNSLPRYCMPENSMPKESAYQNIHDELQLDANPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPVTTDLHNRCVNMIARLFNAKIGEDESAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNMVTGANVQVCWEKFARYFEVELREVKVREDYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGSSVTGWDGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPQDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRFGREGYKSIMENCRENAKVLREGLEKTGCFNILSKDNGVPVVAFSLKDRSCHDEFKISGMLRRHGWIVPAYPMPPAAQHINVLRVVVRAEFSRILAERLVFDITNVLQELEILPPKYNAKITNIVKEEKAIDDDNGVKRSALDAHREIIAQESNKRHKILAA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1052 505 PANTHER GLUTAMATE DECARBOXYLASE 1 504 - -
Lal14g1052 505 Pfam Pyridoxal-dependent decarboxylase conserved domain 34 390 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lal14g1052 505 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 22 454 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lal14g1052 505 SUPERFAMILY PLP-dependent transferases 20 453 IPR015424 -
Lal14g1052 505 Gene3D - 67 369 IPR015421 GO:0003824
Lal14g1052 505 CDD DOPA_deC_like 60 446 - -
Lal14g1052 505 Gene3D - 370 457 - -
Lal14g1052 505 Gene3D - 14 66 - -
Lal14g1052 505 PANTHER GLUTAMATE DECARBOXYLASE 1 504 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1052 Lal-Chr14 12730319 12733770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1052 1 493 Calmodulin-binding Proteins AT5G17330 75.000 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1052 K01580 - gmx:100782330 850.121