Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1050 ATGGTACCCCAACAATCTCAATCTCAATCTTCTGCACCTTCTGCACAAGATGAGGCTTTAAAGAGGAACACCGATTGTGTCTACTTTCTTGCATCTCCTCTTACATGCAAAAAGGGAAATGAATGTGAGTACCGCCATAGCGAGTATGCTCGGGTTAATCCTAGAGATTGCTGGTATTGGTTGAATGGGAATTGCTTGAATCCCAAATGCTCCTTCCGTCATCCGCCTCTTGATGGCCTGATAGGAACACCGCCAGCCACTGCTTCTGGGCCATCTCTGCCACTGTTACAGCATCCAACACCATCTGCAACACATGCACCATATAATTCTAGTAAACCAGCTGTTCCATGCATTTTCTTCCAAAAAGGGCTTTGCTTAAAAGGTGACAGATGCGCTTTCTTGCATGGGCCCATTCCTAATACTGGCAATAAAGTAGTTACACAGGCAGCGATGAATAGCCAAGGAACTGAAGCTCAAATTTTTAAGAAACCATTTGGTGGAATTGAAAAGAATGCGCAGGAAAGGAAAATTTCCCATGGGAATGTTACAAAACCAGTTGGAGGCCTTGAAGTTAAACCTTTCCAAAAAGTTGAAACTGCTCCACAAAAGAAAACTTTTGAGTTGAAGAAGCATGTGCCACCGCCATCTGCTGGATTTGAGGATGAGGCTTCAAGATTTAATGTAACAAGTATTCCACTGGTCATCAATGAGCCTACTGTAGTCCGGTCTAGTCGTTTGCATCAAGCTTATGTTCCAGATGATCATAGCTTCCACAATGGTAAGGACAGTGATGAGTTTCTCAGAGAATCCTCTCCTGGGTTTGATGTTCTTGTAGATGATGATCTTAGGAATTCTGATTACTATCACGGGGAAGATGACTTTGGAAATACAAGAGGTCAAGATGAAAGGAACTTGGACTCTTTGAATGAGTATGATCCAGGACATTCTGCTGATTATAGTTTAGTGGCTGATATTGACAGAGATAGATTTCGTGTGCCCCAAGGTTATGACTCATATGATCATACGCAAGAGACATACATGTGGGAACAGCACAGAAAGCCGTCAGCCCATTTAGAAAGAAGGCCTCACCGCAGATCTGACAGTCCTAACAATGCTGAGGTCTCAGATCTCCGACTTCATATATCCAAGCGCAGGAAGGGTAATGGTTTGAAATCTGTTGTCGCACATGATTATGCTCGTGAAAGTCGTGACGAGGAACGCAGTCACCGGCACTTTCCCAGGATAGATTCACTCCAGTTACCTTCGAATGAGAACTCCATTAGTACTCGCTTCCGAGGAAGAATTAAACTTCCAGAAAATGGTGGTGATGTTCACCAAGAGAGGGAATCAGACAGAGGAAGAATTGGGAGCAGATTGTCATCTGGAAGGTTACCAGCCCCTCATCAAGGAAGGTTTCAAGATAGAATTAGAGGACGGGTGCAAGATGGTGAGAGGGGGAACTTCAGGCAATCATTGCGGGGGAGAGAACTAATGGGGGACAGAACCAATGATTTTTATGCGCCAAAACGTCTTTCCGAACTTAAAAATGGGAGCAGTGAGAATAGGGAGCACCTCTTTCTGGGAAAGAGAAAAAGTTCAAGAGATCACCAACAATCTGATGATGATTTTCAGTTTGAAGGTCCAAAACCTCTTAGTGAAATTCTGAAGGAGAAGAAGAGAGGAGTTGGAGCTGGTGCAGCCTCCCAGAGTGGCAATTCATCTAAGTTTAAGAATATTGAAATTACCAATAACTCAGATCATACATCTCTCGTAAACACACAAAATGGGGGATTGTTAGAGAACATGAAGAATGCCATGAACCATGAAGAAGTATCTAAGCCTCAGGTCACTGATGCAGTTGGAAAAAATGTGGATAATGCAGATTCAAGTCATGGTCAATCATCTGTAGAAGGATTGATCTATGATGAAGCAGCAGAGGATCAGAAATATGAAGGTGATGATCAAGTTGATGGAGAATATGATTATGATCAAGTTGATGAGGGGGACTATGAGTATGAGCAAGTTGATGAGGGTGAAAATCCAGAGCAAGAATACATGGATGAAGAAGAAGATGGGGATGACTTTGCTAAGAAGATTGGTGTCATGCTTACATAA 2115 0.4293 MVPQQSQSQSSAPSAQDEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCWYWLNGNCLNPKCSFRHPPLDGLIGTPPATASGPSLPLLQHPTPSATHAPYNSSKPAVPCIFFQKGLCLKGDRCAFLHGPIPNTGNKVVTQAAMNSQGTEAQIFKKPFGGIEKNAQERKISHGNVTKPVGGLEVKPFQKVETAPQKKTFELKKHVPPPSAGFEDEASRFNVTSIPLVINEPTVVRSSRLHQAYVPDDHSFHNGKDSDEFLRESSPGFDVLVDDDLRNSDYYHGEDDFGNTRGQDERNLDSLNEYDPGHSADYSLVADIDRDRFRVPQGYDSYDHTQETYMWEQHRKPSAHLERRPHRRSDSPNNAEVSDLRLHISKRRKGNGLKSVVAHDYARESRDEERSHRHFPRIDSLQLPSNENSISTRFRGRIKLPENGGDVHQERESDRGRIGSRLSSGRLPAPHQGRFQDRIRGRVQDGERGNFRQSLRGRELMGDRTNDFYAPKRLSELKNGSSENREHLFLGKRKSSRDHQQSDDDFQFEGPKPLSEILKEKKRGVGAGAASQSGNSSKFKNIEITNNSDHTSLVNTQNGGLLENMKNAMNHEEVSKPQVTDAVGKNVDNADSSHGQSSVEGLIYDEAAEDQKYEGDDQVDGEYDYDQVDEGDYEYEQVDEGENPEQEYMDEEEDGDDFAKKIGVMLT 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1050 704 MobiDBLite consensus disorder prediction 288 313 - -
Lal14g1050 704 MobiDBLite consensus disorder prediction 645 694 - -
Lal14g1050 704 MobiDBLite consensus disorder prediction 348 383 - -
Lal14g1050 704 Pfam RNA-binding, Nab2-type zinc finger 116 136 - -
Lal14g1050 704 SUPERFAMILY CCCH zinc finger 112 136 IPR036855 GO:0046872
Lal14g1050 704 MobiDBLite consensus disorder prediction 396 414 - -
Lal14g1050 704 MobiDBLite consensus disorder prediction 527 549 - -
Lal14g1050 704 Gene3D - 103 179 - -
Lal14g1050 704 Gene3D - 10 77 - -
Lal14g1050 704 ProSiteProfiles Zinc finger C3H1-type profile. 111 138 IPR000571 GO:0046872
Lal14g1050 704 PANTHER ZINC FINGER CCCH-TYPE-CONTAINING 11A 4 703 - -
Lal14g1050 704 MobiDBLite consensus disorder prediction 436 456 - -
Lal14g1050 704 MobiDBLite consensus disorder prediction 470 504 - -
Lal14g1050 704 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 4 703 - -
Lal14g1050 704 MobiDBLite consensus disorder prediction 647 691 - -
Lal14g1050 704 ProSiteProfiles Zinc finger C3H1-type profile. 20 49 IPR000571 GO:0046872
Lal14g1050 704 ProSiteProfiles Zinc finger C3H1-type profile. 51 77 IPR000571 GO:0046872
Lal14g1050 704 SMART c3hfinal6 53 76 IPR000571 GO:0046872
Lal14g1050 704 SMART c3hfinal6 112 137 IPR000571 GO:0046872
Lal14g1050 704 SMART c3hfinal6 21 48 IPR000571 GO:0046872
Lal14g1050 704 MobiDBLite consensus disorder prediction 348 504 - -
Lal14g1050 704 Pfam Zinc-finger containing family 21 75 IPR041686 -
Lal14g1050 704 MobiDBLite consensus disorder prediction 288 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1050 Lal-Chr14 12719923 12723659 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lal14g1050 zf-CCCH_3 6.7e-12 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1050 - - lang:109359705 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1050 14 12719923 12723659 Lal7g0461 7 10511967 10515580 LSH
Lal14g1050 14 12719923 12723659 Lal19g0144 19 1221684 1225382 LSH