Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1032 ATGGCTGAATCTCACTCTCCCACACCAACCATAAGCACACTACATGATAATCATAACCACCACCAACCTCAAGAACATTCAGGCTTTGATTGGATGGTACTTGTGGCAGCCATATTATGTGCTTTCCTTTGTGCTCTTGGTCTTAACACCATGTTACAATGTGTATTTCAATGTGCTAGTCGTGTATTCACTGAACCTATGCAATGGTTTTCTACTAGAAGGCTTAATTCTGGGCTTAAGAAGAAAGAAATGGTAGCTTTGCCAACTTCAACTTATAGTTATTCTGGGTCTCCATCTTCATCATCACCACCCTCTAATTGTGCTATTTGCTTAGCTGAATTCTTTGATGGTGACCTAATAAGGTTCCTTCCAATGTGCAATCACTATTTCCATGTGGTTTGCATTGACAAGTGGTTGCTCTCTCATTCTTCTTGTCCTACTTGTAGGCACCTTATCAGGTCTAATGATTTACCTCACTCTCTTCTACCAACCCAATCAAACTAA 504 0.4028 MAESHSPTPTISTLHDNHNHHQPQEHSGFDWMVLVAAILCAFLCALGLNTMLQCVFQCASRVFTEPMQWFSTRRLNSGLKKKEMVALPTSTYSYSGSPSSSSPPSNCAICLAEFFDGDLIRFLPMCNHYFHVVCIDKWLLSHSSCPTCRHLIRSNDLPHSLLPTQSN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1032 167 SUPERFAMILY RING/U-box 106 154 - -
Lal14g1032 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 154 IPR013083 -
Lal14g1032 167 SMART ring_2 107 148 IPR001841 -
Lal14g1032 167 MobiDBLite consensus disorder prediction 1 21 - -
Lal14g1032 167 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Lal14g1032 167 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 14 154 - -
Lal14g1032 167 Pfam Ring finger domain 106 149 IPR001841 -
Lal14g1032 167 MobiDBLite consensus disorder prediction 1 17 - -
Lal14g1032 167 PANTHER OS06G0666500 PROTEIN 14 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1032 Lal-Chr14 12609008 12609511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1032 22 152 C3H Transcription Factor Family AT2G17450 43.478 1.33e-32 113