Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1003 ATGGAATCTGCAATTCGCCTATGCTATAGTTCCCTTCCTAGCGCTCCATCGCGCCAATTCCACGGCGCAAATGAATCATCATATGCAAGAGCAAGCACAATTCGTCTCAAGTTTAATCGCGCCGCTATGCGCCATGAAGTCACGAGTTCATTCAGTCGTGTAAACTGCATGCTTAATGATAAGTCCTATATGCCTTCAGAGAATGAGGAGAATAGTGGCAACAAAATATTGAGAGGATTTAGTACAACTTCTCTAGCTTTGGCTTGTGTTGTTGGATTGTTTAATCTTAGTACTAAGTTGAATCCTAAGTTTAACACAGTTTATGCTACTCCTTGGCCTTTTTCACATGCAAATGTGTCATCTGATATAAGAAGTGCATCACTATCACATGGATCAAAAGATGCACTTGAGTCACTATGGCAAATAATCAACATAGATCACACAAAAAAGACTCCTCCCAAGATTGATCATGAACCTGATGAAAATACCATTCATTCCTTAAAGGTATATGCTGTGGGTCAAAGCAAATCTGGGAAGAAAGATAGAGCAGTGAAGTTAGTAGAAGATACATACAATAAATATAAGGACAATTCAACAGGGCTCAACCTTGGATTGGCATGGATAGAACTTCTCATATTTCAGGGGAAATTTGAAAAAGCTCGTGATGGGCTTCATAATATTATAAGTTATCACATGCAGATTTCATCTGATGAGCCCAAACAGGACTTCAAAGTGTATTATGATGCGAAGTTCGGTAGGAAGAAAGTGGTGGAGAATGGGGACAGTGATGATAAAGCGGTTAGTAATGGAAATTCGGTGGACATTGTATCTAATGATAATGTGAATCCTCGAAGAACTTCGGATAGGGCTATTTATGAGCAGTTTCAAACTCAGGGGCAGAATCTGACGCAGTCAAATGGTTTTTCACACAACTCCATCGATGAAAGGCCGCCAAAGTCTTTGCTTCCACCTTTTGAGAGCGCTGATATGCGGGCATTAGGAGAAAGCTTAAGTCGAGATATAATTCGTGGGAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAGAATGCCAAACGTTTACTGAAAGAGGCCGTTGTGATGCCTATTAAGTATCCCAAGTACTTTACTGGTCTGTTATCACCATGGAAAGGCATTCTCCTTTTTGGCCCCCCAGGGACAGGAAAGACAATGCTTGCAAAGGCAGTCGCAACAGAGTGCAAGACGACATTTTTTAATATTTCAGCATCATCTGTTGTCAGCAAATGGCGGGGCATGCACCATGCGCCCTCAACTATATTTCTTGATGAAATTGATGCAATCATTAGTCAACGTGGTGAAGCACGCAGTGAACATGAAGCAAGCAGACGGTTAAAAACTGAGTTGCTGATTCAGATGGATGGTTTGACTCGGACCGATGAGCTTGTTTTTGTTTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCTATGCTCCGACGTCTTGAGAAGCGAATCCTTGTACCACTTCCAGAACCAGTAGCAAGAAGAGAAATGTTTGAGCAACTACTTCCTCCACAGCCTGGTGAGGAACAACTCCCCCATGATTTACTGGTAGACCGGACAGAAGGATATTCAGGCTCAGATATCCGATTGCTTTGTAAAGAGACAGCTATGCAGCCCTTGAGACGCTTGATGTCACAACTTGAACTGAAAGAAGAGGTGATGCCTGAAGAAGAGTTGCCTAAAGTTGGGCCAATCAGACCTGAAGATATAGAGACAGCTCTAAAGAACACAAGGCCCTCTGCTCATCTCCATGCCTACAAATATGAAAAGTTCAATGATGATTATGGCAGTCAAATTCTTCAATGA 1857 0.4238 MESAIRLCYSSLPSAPSRQFHGANESSYARASTIRLKFNRAAMRHEVTSSFSRVNCMLNDKSYMPSENEENSGNKILRGFSTTSLALACVVGLFNLSTKLNPKFNTVYATPWPFSHANVSSDIRSASLSHGSKDALESLWQIINIDHTKKTPPKIDHEPDENTIHSLKVYAVGQSKSGKKDRAVKLVEDTYNKYKDNSTGLNLGLAWIELLIFQGKFEKARDGLHNIISYHMQISSDEPKQDFKVYYDAKFGRKKVVENGDSDDKAVSNGNSVDIVSNDNVNPRRTSDRAIYEQFQTQGQNLTQSNGFSHNSIDERPPKSLLPPFESADMRALGESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGMHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARREMFEQLLPPQPGEEQLPHDLLVDRTEGYSGSDIRLLCKETAMQPLRRLMSQLELKEEVMPEEELPKVGPIRPEDIETALKNTRPSAHLHAYKYEKFNDDYGSQILQ 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1003 618 MobiDBLite consensus disorder prediction 302 321 - -
Lal14g1003 618 SMART AAA_5 383 507 IPR003593 -
Lal14g1003 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 339 597 IPR027417 -
Lal14g1003 618 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 235 616 - -
Lal14g1003 618 PANTHER AAA DOMAIN-CONTAINING 235 616 - -
Lal14g1003 618 MobiDBLite consensus disorder prediction 259 280 - -
Lal14g1003 618 Gene3D - 506 594 - -
Lal14g1003 618 MobiDBLite consensus disorder prediction 264 280 - -
Lal14g1003 618 Gene3D - 346 608 IPR027417 -
Lal14g1003 618 Pfam ATPase family associated with various cellular activities (AAA) 387 504 IPR003959 GO:0005524|GO:0016887
Lal14g1003 618 CDD AAA 354 505 - -
Lal14g1003 618 Pfam AAA+ lid domain 533 567 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1003 Lal-Chr14 12345229 12357147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1003 381 577 Calmodulin-binding Proteins AT3G56690 33.333 1.10e-24 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1003 14 12345229 12357147 Lal14g1003 14 12345229 12357147 ECH