Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0997 ATGGACGTGAGCGAAGAAGTTAGAGCAGCTCACAAGCGAGAATTCGCCGATTTCTTAGACCAAGATGTCGGAAAAGGCATATACATGGACGAAATCAAAGCCCTCATCAACCACAAGCGCCACCGCCTCATCATCAACATTTCCGATCTTCATTCCTTCCGTGACCTCGGCAATAGGATTTTGAGGAATCCGAGTGAGTACATGCAATCGTTCTGTGATGCGGTTACTGATGCAACTCGTGCGATTGATCCGAAGTATTTGAAAGAAGGGGAACAAGTGCTTGTTGGATTTGAAGGTCCTTTTGTTTCTCGTCGTGTTACGCCGAGGGATCTTCTCTCTGAATTCATTGGTTCTATGGTCTGTGTTGAGGGAATTATCACCAAATGTTCTCTGGTAAGACCAAAGGTTGTCAAAAGTGTTCATTTCTGCCCAACCACAGGAAACTTCACTACACGAGAATATCGAGATATAACATCCAATTTGGGTTTGCCCACAGGATCGGTTTATCCTACAAGGGATGAAACTGGCAACTTACTCGTGACAGAGTATGGATTGTGCAAATATAAAGATCATCAAACCTTGTCCATGCAAGAAGTTCCCGAGAACTCTGCTCCTGGCCAGCTCCCAAGAACAGTGGATGTCATAGTAGAAGATGATCTTGTTGATTCTTGCAAGCCCGGAGATCGTGTGGCTATTGTTGGGATATATAAGGCTCTTCCAGGGAAAAGCAAAGGCAGTGTAAACGGTGTATTCAGGACTGTGCTCATAGCCAACAATGTTTCTCTTCTCAACAAAGAGGCTAACACACCAATCTACAGTCCTGAAGACCTGAAAAACATAAAAAAGATAGCTGAAAGAAACGATACATTTGACCTACTTGGTAATTCACTTGCACCTTCTATATATGGGCATATTTGGATAAAGAAAGCAGTCGTTTTATTGATGCTTAGCGGAGTGGAAAAGAACTTGAAGAATGGAACTCACTTGCGAGGTGACATTAACATGATGATGGTTGGTGATCCCTCTGTTGCAAAGTCTCAACTCTTAAGGGCAATTATGAATATTGCTCCCTTGGCCATATCAACTACAGGCCGGGGTTCTTCCGGGGTTGGTTTGACAGCAGCAGTTACTTCAGATCAAGAAACAGGGGAAAGAAGGCTAGAAGCTGGGGCAATGGTTCTTGCTGACAGAGGCGTTGTCTGCATTGATGAATTTGACAAAATGAATGATCAAGATCGTGTTGCTATACATGAAGTTATGGAACAGCAGACCGTAACTATAGCCAAAGCTGGTATCCATGCATCACTTAATGCTCGATGCAGTGTGATAGCTGCTGCAAACCCCATATATGGAACTTATGATCGTTCACTGACCCCAACCAAAAATATTGGCCTCCCTGACTCCTTGCTTTCTCGGTTTGATCTATTGTTTATTGTGTTGGATCAAATGGATCCTGATATTGATCGTAGAATATCAGAGCATGTCTTGCGGATGCATCGGTTTATCTCTACCACTGATGGAGGTGAGGCAACACTTGATGGGAGCTCAGGATATGGAAGAGAAGATGAAGCTGATACTGAATCATCTGTCTTTGTCAAATATAACAGGATGCTACATGGGAAACAGAAAAAGAAAAGGAATCAGAAAGATGATAATACACTTACAATAAAGTTTCTTAAAAAGTATATTCATTATGCTAAGCATAGGATTCAACCTGAACTGACTGATGAGGCATCTGACCGCATTGCCACAGCATATGCTGAGCTCAGAAATGCTGGCTCAAATGCAAAGACTGGAGGAACACTGCCTATAACTGCCAGAACTTTAGAAACCATAATACGTCTCTCAACTGCTCATGCCAAATTGAAGTTGAGCAGAAAGGTTTTAAAATCTGACGTTGAAGCTGCTTTGAAGGTTCTTAATTTTGCAATATATCACCAAGAACTGACAGATATGGAGGAGCGTGAGAGGAACAGGGCTGACCAACATCCTATTGAAAATGATGGTCCTGGCCGTGGTCCTAGAAATGGAACAGGGCCAACACCAGATTTCATGGAAGTAGATGATTCTGCACCAGCTCAAACTGCTGCCATTCTCACTCCTGGAAGAATTGAAGCATTTAATTCTGTATTTGGTCAGCATATGCGTGCCAACCGATTGGATCTCATATCCATTGCTGACATAGAGAATGTTGTCAACCAAGGGGCAGATTCCAATTACAGCTCGGCAGATATATTAGTCCTATTACAGAAGTTGCAAGATGACAATAGAGTGATGATAGTTGATGGGATGGTGCATATGATAACATAG 2310 0.4268 MDVSEEVRAAHKREFADFLDQDVGKGIYMDEIKALINHKRHRLIINISDLHSFRDLGNRILRNPSEYMQSFCDAVTDATRAIDPKYLKEGEQVLVGFEGPFVSRRVTPRDLLSEFIGSMVCVEGIITKCSLVRPKVVKSVHFCPTTGNFTTREYRDITSNLGLPTGSVYPTRDETGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIVEDDLVDSCKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVSLLNKEANTPIYSPEDLKNIKKIAERNDTFDLLGNSLAPSIYGHIWIKKAVVLLMLSGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVLADRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVIAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPDIDRRISEHVLRMHRFISTTDGGEATLDGSSGYGREDEADTESSVFVKYNRMLHGKQKKKRNQKDDNTLTIKFLKKYIHYAKHRIQPELTDEASDRIATAYAELRNAGSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKVLKSDVEAALKVLNFAIYHQELTDMEERERNRADQHPIENDGPGRGPRNGTGPTPDFMEVDDSAPAQTAAILTPGRIEAFNSVFGQHMRANRLDLISIADIENVVNQGADSNYSSADILVLLQKLQDDNRVMIVDGMVHMIT 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0997 769 Pfam MCM AAA-lid domain 558 641 IPR041562 -
Lal14g0997 769 Gene3D - 271 665 IPR027417 -
Lal14g0997 769 CDD MCM3 292 643 - -
Lal14g0997 769 MobiDBLite consensus disorder prediction 653 668 - -
Lal14g0997 769 Gene3D - 109 239 IPR012340 -
Lal14g0997 769 Gene3D - 3 99 - -
Lal14g0997 769 SMART AAA_5 331 484 IPR003593 -
Lal14g0997 769 Gene3D - 135 189 - -
Lal14g0997 769 SUPERFAMILY Nucleic acid-binding proteins 13 259 IPR012340 -
Lal14g0997 769 ProSitePatterns MCM family signature. 398 406 IPR018525 GO:0003677|GO:0005524|GO:0006260
Lal14g0997 769 Pfam MCM N-terminal domain 12 83 IPR027925 -
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 330 345 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 390 404 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 418 431 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 442 454 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein family signature 469 477 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 PANTHER DNA HELICASE 3 761 - -
Lal14g0997 769 Pfam MCM OB domain 109 239 IPR033762 -
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 181 195 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 207 219 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 458 468 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 491 501 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Lal14g0997 769 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 632 647 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Lal14g0997 769 ProSiteProfiles MCM family domain profile. 289 495 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 SMART mcm 104 645 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 MobiDBLite consensus disorder prediction 653 688 - -
Lal14g0997 769 Pfam MCM P-loop domain 277 499 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 3 761 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lal14g0997 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 299 647 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0997 Lal-Chr14 12297550 12303222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0997 1 577 Core DNA Replication Machinery Family AT5G46280 82.872 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0997 K02541 - jre:108990186 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0997 14 12297550 12303222 Lal14g0997 14 12297550 12303222 ECH