Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0995 ATGAAACGACTGCAAGAAGAAACAGAACAAATACTCCTTCCTACTCATCCAAACATGGCGAAGAACAAGTCTCTATCCTCTTCTACTACTTCTTCTTCTTCTCCCTCTGCTCAACCCTCCACAATCACTACACGCTCTTCTTCTTCCACTGCCAGCAAACTAGTATTGAAGATTAAAACAAATGGGGGAATGAAGAGATCGATGCAACAGACTCATTCCAGAACAAAACCTAAAGCTACTCAAAAGAAGAGCAAACAAAAGATTGATGCTAAGAAGCCAAAGAAACCACCCACCGCTTTCTTCTACTTCTTGGAGGATTTTCGCAAAGGGTTTCAAGATCAAAATCCAGATGTCAAATCAATGCGTGATGTTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTATGATGAGAAGGTTCAATACTATGATATAGCAACCGAAAAACGCGCTGAATTTGATAGAGCAATGGCAGAATATGAGAAGAAAATGGAAAGTGGTGAATACGATGAAACTAGTGATGAATCAGAGTTTGATGAGTAA 546 0.3993 MKRLQEETEQILLPTHPNMAKNKSLSSSTTSSSSPSAQPSTITTRSSSSTASKLVLKIKTNGGMKRSMQQTHSRTKPKATQKKSKQKIDAKKPKKPPTAFFYFLEDFRKGFQDQNPDVKSMRDVGKACGEKWKTMTYDEKVQYYDIATEKRAEFDRAMAEYEKKMESGEYDETSDESEFDE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0995 181 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 93 162 IPR009071 -
Lal14g0995 181 MobiDBLite consensus disorder prediction 11 56 - -
Lal14g0995 181 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 20 180 - -
Lal14g0995 181 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 20 180 - -
Lal14g0995 181 Coils Coil 144 164 - -
Lal14g0995 181 MobiDBLite consensus disorder prediction 1 95 - -
Lal14g0995 181 Pfam HMG (high mobility group) box 93 162 IPR009071 -
Lal14g0995 181 SMART hmgende2 92 163 IPR009071 -
Lal14g0995 181 Gene3D High mobility group box domain 76 177 IPR036910 -
Lal14g0995 181 CDD HMGB-UBF_HMG-box 93 159 - -
Lal14g0995 181 SUPERFAMILY HMG-box 81 170 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0995 Lal-Chr14 12279375 12283889 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lal14g0995 HMG_box 2.1e-17 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0995 - - lang:109362761 246.899