Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0986 ATGTCTCCGAGAAAGATTGAAATGAAATTGATGGAGAACAAAAGCTCTAGGCTGGTCACTTTTTCTAAGCGCAAATGTGGCCTTTTTAAGAAAGCAATGGAGCTATCCATTCTTTGTGGTGTTGAAATTGTTATTCTTTTATTTTCTGTTGGTGGCAAGGCTTACTCTTTTGGTCATCCAAGCATTGAGGCTGTGACTAAGAAGTTCCTTCACCAAGGACAAGGATCACATATGAGTCATGGTGAGTCCTCAAATCATGACAATATTGGTAAGCTTAGCAAGGAACTTCAGGAGCTGAAGGACCAGATTCAAGTGGAGAAGGATAAGAAGGAGAGGCTTGATAAAGCTCTTAGCAAGTACAAGTTTATCAAAGGCAAACTTGCCATTGATGATCTTAATTATGAGGAGCTTGTGAACTTCAAGGCTTCTTTGGGTATGCTCAATGCTGTCTTGAAAGTGCCCATGAATGAGCTGGAGGCAGCAGCATCTTTGCTTCTTCTTAGTGAGAATCATAATAAGGAGACTGAGATTTGA 534 0.4045 MSPRKIEMKLMENKSSRLVTFSKRKCGLFKKAMELSILCGVEIVILLFSVGGKAYSFGHPSIEAVTKKFLHQGQGSHMSHGESSNHDNIGKLSKELQELKDQIQVEKDKKERLDKALSKYKFIKGKLAIDDLNYEELVNFKASLGMLNAVLKVPMNELEAAASLLLLSENHNKETEI 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0986 177 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Lal14g0986 177 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 57 IPR002100 GO:0003677|GO:0046983
Lal14g0986 177 Gene3D - 13 85 IPR036879 GO:0003677|GO:0046983
Lal14g0986 177 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Lal14g0986 177 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Lal14g0986 177 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Lal14g0986 177 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Lal14g0986 177 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL29 4 175 - -
Lal14g0986 177 PANTHER MADS BOX PROTEIN 4 175 - -
Lal14g0986 177 Coils Coil 89 116 - -
Lal14g0986 177 SUPERFAMILY SRF-like 1 73 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0986 Lal-Chr14 12156456 12156989 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0986 1 168 Type I MADS-box Gene Family AT2G34440 34.706 9.37e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Lal14g0986 SRF-TF 7.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0986 - - lang:109341334 253.447