Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0978 ATGGCAGCCTCAACCATGGCCCTCTCTTCCTCATCCTTGGCCGGCCAGGCGGTGAAGCTCTCCCCATCAGCTCCAGAGCTCGGAGTTGGAAGGATCTCCATGAGGAAAACTGTTACCAAGAAAGTTTCTTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGCGAGGCCCCAAGTTACTTGACCGGTGAGTTCCCTGGTGACTATGGTTGGGACACTGCTGGGCTTTCAGCTGACCCAGAGACTTTTGCCAAGAACCGTGAGTTGGAGGTGATCCACTCACGGTGGGCTATGCTTGGAGCTCTGGGAATTGTCTTTCCAGAGCTCTTGTCTCGCAACGGTGTTAAATTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGTGAGGGCGGACTTGACTACTTGGGCAACCCAAGCTTGATCCATGCTCAGAGTATCCTTGCCATATGGGCTACCCAAGTTATCTTGATGGGAGCAGTTGAGGGTTACAGAATTGGTGGTGGGCCACTTGGAGAGGTAATTGACCCACTTTACCCTGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGCTCAAGGTGAAGGAACTAAAGAATGGAAGGTTGGCCATGTTCTCCATATTTGGTTTCTTTGTTCAGGCCATTGTCACTGAGCTCTTGTCTCGCAACGGTGTTAAATTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGTGAGGGCGGACTTGACTACTTGGGTAACCCAAGCTTGATCCATGCTCAGAGTATCCTTGCCATATGGGCTACCCAAGTTATCTTGATGGGAGCAGTTGAGGGTTACAGAATTGCTGGTGGGCCACTTGGAGAGGTAATTGACCCACTTTACCCTGGTGGCAGCTTTGACCCATTGGGTCTTGCTGATGACCCAGAGGCTTTTGCCGAGCTCAAGGTGAAGGAGCTAAAGAATGGAAGGTTGGCCATGTTCTCAGTGTTTGGTTTCTTTGTTCAGGCCATTGTCACTGGTAAGGGTCCATTGGAGAACCTTGCCGACCATCTTGCAGACCCAGTCAACAACAATGCCTGGGCATTTGCCACCAACTTTGTCCCCGGA 1146 0.5218 MAASTMALSSSSLAGQAVKLSPSAPELGVGRISMRKTVTKKVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGIVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIGGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSIFGFFVQAIVTELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSVFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0978 382 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Lal14g0978 382 Pfam Chlorophyll A-B binding protein 227 349 IPR022796 -
Lal14g0978 382 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 233 - -
Lal14g0978 382 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 233 382 - -
Lal14g0978 382 SUPERFAMILY Chlorophyll a-b binding protein 47 234 - -
Lal14g0978 382 Gene3D Chlorophyll a/b binding protein domain 233 376 - -
Lal14g0978 382 Gene3D Chlorophyll a/b binding protein domain 55 232 - -
Lal14g0978 382 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 233 382 IPR001344 GO:0009765|GO:0016020
Lal14g0978 382 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 233 IPR001344 GO:0009765|GO:0016020
Lal14g0978 382 SUPERFAMILY Chlorophyll a-b binding protein 231 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0978 Lal-Chr14 12102135 12108341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0978 188 382 Chloroplast and Mitochondria Gene Families AT1G29930 78.173 5.99e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0978 K08912 - sly:101263969 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0978 14 12102135 12108341 Lal14g0978 14 12102135 12108341 ECH