Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0973 ATGGAAAAAGAGCCTTTATTACCATATTCTAGTCCTAGATTAAGGCCTCAATTCCCACCAAACCTTTTTCCATTACCAGAGAATGATGAATTCAATCTCCCTGTAACCCCAAAGGAGTTAAAAGATAGACTCATATTTGGTCCTTCACCAAAAGACCCTTCTTCACCTTTGGTTGAAGCCTTAACACTTTCCCTTAAACCTTCTTCTTCTTCAAATCAGGACCTTTTATTTGATGCACAACAACAACAACAATTATCTTCATGGCTTATTGATCCTGATTATGCGTACCGCAAATCAAATCTTCACCGGTCAAAAACTGCGCCAGCTATAGCTGTTGCAAGTGATTTCAGTCGCCATTCATCTGAGGAAAAACCCCAGTTTGGTACTCAGAGTATTGTTCATCAAGCTTGTATTTTTCTTGTTCTTTATTTATCATTAGGGGTGGTGATTTATTGGTACAATCGTCATAATTTTTCATCTAGTGAGACTCATCCTATAGTGGATGGTTTGTATTTTTGCATAGTCACAATGTGCACAATAGGTTATGGTGACATTACTCCAAATAGTACAACAACCAAGCTTTTCGCGATTTTGTTCGTTTTGGTTGGTTTCGGTTTTATAGACATATTGCTAAGTGGGATGGTAAGTTATGTCCTTGATTTGCAAGAGAATCATTTGTTGAGGGCGGTTAAGAGTAAGGGTCAGAAGGATGGGAGGTCATATTTAGTTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCCTTGGCATTGGGGGTCGTGGTCCTTTGTATTGGATTCGGTGTCGGAGTTCTGCATTTTGTTGAAAAGCTTGATTGGTTGGATTCGTTTTATCTTTCGGTTATGTCAGTTACAACAGTTGGGTACGGTGATAAAGCGTTCAAGACCGTGCATGGTCGTATATTTGCTGCAATTTGGTTGCTTGTGTCAACGCTTACAGTGGCCCGAGCGTTCCTATATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTGCTGAGTTTCTTGCTGCAGACATTGACAATAATGGCTTTGTGAGTAAATCTGAATATGTTATATACAAGCTGAAGGAGTTGGGTAAAGTATCAGATAAAGACATTATGCAGATTAGTGAGAAGTTTGACATATTAGATTCCGGCAAATGTGGAAAGATAACACTTGCTGATCTCATGGAGAGTCATCATGGATGA 1254 0.4011 MEKEPLLPYSSPRLRPQFPPNLFPLPENDEFNLPVTPKELKDRLIFGPSPKDPSSPLVEALTLSLKPSSSSNQDLLFDAQQQQQLSSWLIDPDYAYRKSNLHRSKTAPAIAVASDFSRHSSEEKPQFGTQSIVHQACIFLVLYLSLGVVIYWYNRHNFSSSETHPIVDGLYFCIVTMCTIGYGDITPNSTTTKLFAILFVLVGFGFIDILLSGMVSYVLDLQENHLLRAVKSKGQKDGRSYLVDVKKGRMRIRMKVALALGVVVLCIGFGVGVLHFVEKLDWLDSFYLSVMSVTTVGYGDKAFKTVHGRIFAAIWLLVSTLTVARAFLYLAEARVDKRHRRMAKWILGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKELGKVSDKDIMQISEKFDILDSGKCGKITLADLMESHHG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0973 417 SUPERFAMILY Voltage-gated potassium channels 131 218 - -
Lal14g0973 417 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
Lal14g0973 417 SUPERFAMILY EF-hand 354 415 IPR011992 -
Lal14g0973 417 Pfam Ion channel 262 331 IPR013099 -
Lal14g0973 417 Pfam Ion channel 138 218 IPR013099 -
Lal14g0973 417 SUPERFAMILY Voltage-gated potassium channels 246 353 - -
Lal14g0973 417 PANTHER TWO-PORE POTASSIUM CHANNEL 3 82 411 - -
Lal14g0973 417 Gene3D - 130 231 - -
Lal14g0973 417 PRINTS Two pore domain K+ channel signature 175 203 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lal14g0973 417 PRINTS Two pore domain K+ channel signature 294 303 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lal14g0973 417 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 82 411 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lal14g0973 417 Gene3D - 241 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0973 Lal-Chr14 12032273 12036056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0973 4 417 Ion Channels AT4G18160 59.722 3.55e-172 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0973 K05389 - gmx:100804249 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0973 14 12032273 12036056 Lal14g0973 14 12032273 12036056 ECH
Lal14g0973 14 12032273 12036056 Lal19g0175 19 1517955 1521097 LSH