Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0965 CAGGCTCATCTTAACTTGCAGAAAAGAAAGTCTACCTTGAAAAATGATGGGATTCCTGATTCATTGAAGTGCACTTCACCTTTTATCTTAGCTAGCAAATTTTTGACTTGCATTTGTGAGCAGCCAAAATATGACTTTACCAGAGGAGAAAAATATAGTGAGGATGAGGATAGCAACAATGTTGGTAACAACAATGATGAAGAGAAAACAGGAGATAATGGTGCAGTAGATGATGATCAAGAGGAAGGAGAGTACTTATTAGGAGATGAATATCCAACTGCTACAGAGGAAGAACTTCACAAAGGTATACTCACAAAAGATGCAGATGATAAGCATGAGCCTTCTACTAGACAATTCAGCCATGGATGTTACTCGGTTAAAGGCAAGATGGAGCATGGGATGGAAGACTATATTTTTGCTCAACACAACAATCTCAATGGTTATGATTTGGGATTGTATGCAATATTTGATGGTCATTCAGGCCATGATGTTGCAAAGTACTTGCAAAGCCATCTATTTGAAAATATAGTGAATGAGCCTGATTTCTGGGAAAATCCTGTGCATGCTATTAAAAGAGCATGTAAAGCTACAGATGATGAGATTTTAGAAAATATAGCTGATTCGCGCGGAGGATCAACAGCAGTTGCAGCAATACTAATCAATGGTGTAAAGCTAGTGGTAGCCAATGTCGGCGATTCTCGAGCAATAGCATGCAAGAATGGTGTTGCCAAACCACTTACCGTTGATCATGAACCAGAGAAGGAGAGAGATCTTGTTGAGAGCAGGGGAGGCTTTGTGGTTACAATGCCTGGATTAGGGAACGTCCCAAGAGTGGATGGTGTATTAGCAATGACACGAGCATTTGGAGATGGAAGACTGAAGGACCACATTACTGCAGAACCAGATGTGACTATTCAAAAGATTGAAGAGGACACTGAGTTCATCATTCTGGCAAGTGATGGTTTGTGGAAGGTGATGACAAATCAGGAAGCTTGTGATTGTATCAAGGATGTTGATGATGCTTATAAAGCATCTAAAAAGTTGGTTAAAGAAGCCAAATCTATGGGAAGCTATGATGATATTTCATGCGTAGTTGTTATGTTCTAG 1107 0.3984 QAHLNLQKRKSTLKNDGIPDSLKCTSPFILASKFLTCICEQPKYDFTRGEKYSEDEDSNNVGNNNDEEKTGDNGAVDDDQEEGEYLLGDEYPTATEEELHKGILTKDADDKHEPSTRQFSHGCYSVKGKMEHGMEDYIFAQHNNLNGYDLGLYAIFDGHSGHDVAKYLQSHLFENIVNEPDFWENPVHAIKRACKATDDEILENIADSRGGSTAVAAILINGVKLVVANVGDSRAIACKNGVAKPLTVDHEPEKERDLVESRGGFVVTMPGLGNVPRVDGVLAMTRAFGDGRLKDHITAEPDVTIQKIEEDTEFIILASDGLWKVMTNQEACDCIKDVDDAYKASKKLVKEAKSMGSYDDISCVVVMF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0965 368 PANTHER ALPHABET, ISOFORM E-RELATED 81 368 - -
Lal14g0965 368 CDD PP2Cc 119 366 IPR001932 -
Lal14g0965 368 Pfam Protein phosphatase 2C 130 361 IPR001932 -
Lal14g0965 368 MobiDBLite consensus disorder prediction 50 79 - -
Lal14g0965 368 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 81 368 - -
Lal14g0965 368 Gene3D - 101 368 IPR036457 -
Lal14g0965 368 SMART PP2C_4 110 366 IPR001932 -
Lal14g0965 368 ProSiteProfiles PPM-type phosphatase domain profile. 120 368 IPR001932 -
Lal14g0965 368 SUPERFAMILY PP2C-like 117 368 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0965 Lal-Chr14 11972172 11975440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0965 117 368 PP2C-type Phosphatase Gene Family AT4G28400 57.708 8.04e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0965 - - gmx:100814772 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0965 14 11972172 11975440 Lal14g0965 14 11972172 11975440 ECH