Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0948 ATGGATAAAGGAGAAGAAAAGCTTACAAAGATGGAAATTGATCTCTCTTTGAAAATAGATCCTGATCAGCATAATGAAGAAGAAACAAAGATTGATGAGAAAGTAAAAGAAGATAGGGATGAAGAAATGACAAGTAAAGATAATAAGGAAGAACTTCCTGAAGCAACAGTTGGTGAAATAGAAGATGATGCATCAATTGTAGAAGCATCTTTGCAAGATAATACAAAAACAAGAGAGTTAAGTGTGTTAAAAATGGAGATGGAGAACATGAAAGAGGAAAACAAAGTTCTAAGGAAAGTGGTGGAACAAACAATGAAAGATTACTATGATCTTCAAATGAAATTTTCAATCATCCAAGAAAACAATAAAAGAAAGGATCATCAAATTTCTCTCTCACTTCAAGACATGGCAACCACCAGCAACGAAGGACCATCAAGAATTCTTGAAATCTTGAATAACAAAATCCAAAGTGCACCTCCATCTCCACCAAACAACAGTGATAGTTTAAGTGAAAGTGAATTGGGTTTATCACTAAGTTTGCACACAAGTACAAGTGAAAAAGAAAAGGAGGAAGATATTAAAGAAGAGAACAAAGAACAATTAGCAAGTTTTGCATCAGTGCAGAACAAATTACAGCAGATACATAACTTATCTGGTATTGCTACCCATGCTGCATCACCTCCTAATAGAAAGGCTAGGGTTTCAGTCAGAGCAAGATGTGAAACAAACACAATGAGTGATGGATGCCAATGGAGAAAATATGGACAGAAAATTGCAAAGGGAAATCCATGTCCACGAGCCTATTATCGTTGCACTGTAGCTGCAGGATGCCCCGTAAGGAAACAGGTGCAAAGATGCATAGATGACATGTCCATACTAATCACAACATATGAAGGAACACATAACCATCCACTCCCTGTTGGTGCAACTGCAATGGCTTCTACAGCTTCTGCAGCAACTTCTTTTGTATTGTTAGATTCAAGCAACCCTATTTCTGATATTGGAACCTCTACTTTCACTCAACCTTCATCACTCCCTTACAATACTTTCCACTCTTTAAACCAACCACCTTCCTCCAATATTAGAACCATTAACCATTTTAATGATCCCTCCAAAGGGATTGTTCTTGATCTCACCAATAATCTCAATGATCACCCTTTACGTTTTCCCTTTGGTAGTACCTCCTCGAATGCAACAATGAGTGATCCTCGTTTATCTTGGATGCCAAACAAGTACCAAAGTGGTGGTAGTAGTGCAATTGCAATGAACAATTTTCATAACCCTACTAGACAAGTAGTGGATAATCAAGATCATGATCACAATGTGTCAGCAATTGCATCTGATCCGAAGTTTAGGAATGCGGTTGCAGCAGCCATAACATCACTCATGAATAAAGAGAGCCATGGTATTGGTCCTAGGAGTGGCCAAAATGGTAGCTCTAGTAACAACAATTGGGTCTTAGATTCTCTTTCAACAAATGGCAAGTCCACTTGA 1494 0.3788 MDKGEEKLTKMEIDLSLKIDPDQHNEEETKIDEKVKEDRDEEMTSKDNKEELPEATVGEIEDDASIVEASLQDNTKTRELSVLKMEMENMKEENKVLRKVVEQTMKDYYDLQMKFSIIQENNKRKDHQISLSLQDMATTSNEGPSRILEILNNKIQSAPPSPPNNSDSLSESELGLSLSLHTSTSEKEKEEDIKEENKEQLASFASVQNKLQQIHNLSGIATHAASPPNRKARVSVRARCETNTMSDGCQWRKYGQKIAKGNPCPRAYYRCTVAAGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAATSFVLLDSSNPISDIGTSTFTQPSSLPYNTFHSLNQPPSSNIRTINHFNDPSKGIVLDLTNNLNDHPLRFPFGSTSSNATMSDPRLSWMPNKYQSGGSSAIAMNNFHNPTRQVVDNQDHDHNVSAIASDPKFRNAVAAAITSLMNKESHGIGPRSGQNGSSSNNNWVLDSLSTNGKST 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0948 497 MobiDBLite consensus disorder prediction 183 198 - -
Lal14g0948 497 Coils Coil 80 107 - -
Lal14g0948 497 MobiDBLite consensus disorder prediction 466 497 - -
Lal14g0948 497 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 491 IPR044810 GO:0003700
Lal14g0948 497 MobiDBLite consensus disorder prediction 155 198 - -
Lal14g0948 497 MobiDBLite consensus disorder prediction 470 497 - -
Lal14g0948 497 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal14g0948 497 Gene3D WRKY domain 230 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal14g0948 497 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 12 491 - -
Lal14g0948 497 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal14g0948 497 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal14g0948 497 MobiDBLite consensus disorder prediction 155 182 - -
Lal14g0948 497 MobiDBLite consensus disorder prediction 1 54 - -
Lal14g0948 497 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0948 Lal-Chr14 11823407 11826221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0948 11 373 WRKY Transcription Factor Family AT1G68150 45.576 1.83e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal14g0948 WRKY 3.2e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0948 14 11823407 11826221 Lal14g0948 14 11823407 11826221 ECH
Lal14g0948 14 11823407 11826221 Lal19g0192 19 1722348 1726210 LSH