Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0920 ATGGGTGATAATAACAATGTCAACCTTCCACCAGGGTTTAGGTTTTATCCAAGTGATGAAGAACTTATTGTTCATTTTCTTCATAGAAAAGCATCACTCTTACCTTGTCATCCAGATGTTATTCCAGATCTTGACCTATACCCTTATGATCCTTGGGAACTTGATGGTAAAGCTTTGGCAGAGGGAAATCAATGGTACTACTATAGCAGAAGGACTCAAAATAGGGTCACTAGCAATGGTTATTGGAACCCAATGGGAATGGAAGAACCAGTGGTTACTAGTTCAAGCAACAAGAGAGTTGGTATGAAGAAATTTTATGTGTTTCATATTGGAGAAGCTCATGATGGTGGTAGCAAAACTAATTGGATAATGCAAGAGTATCGTTTATCAGATTCTGCTTCTTCTAGTAGATCATCCAAAAGAAAAACACAACCAAAAACAACAGTTAGTGATCATAGTAAATGGGTTATATGTAGAGTTTATGAACATAACGATAACGATGATGATGACGACGGTGACAGTGGAATAGAACTATCTTGTTTGGACGAAGTGTTCTTATCATTAGACGATCTTGAAGAAATTAGTCTACCAAATTAG 597 0.3668 MGDNNNVNLPPGFRFYPSDEELIVHFLHRKASLLPCHPDVIPDLDLYPYDPWELDGKALAEGNQWYYYSRRTQNRVTSNGYWNPMGMEEPVVTSSSNKRVGMKKFYVFHIGEAHDGGSKTNWIMQEYRLSDSASSSRSSKRKTQPKTTVSDHSKWVICRVYEHNDNDDDDDGDSGIELSCLDEVFLSLDDLEEISLPN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0920 198 ProSiteProfiles NAC domain profile. 9 163 IPR003441 GO:0003677|GO:0006355
Lal14g0920 198 Gene3D NAC domain 18 167 IPR036093 GO:0003677|GO:0006355
Lal14g0920 198 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 6 195 - -
Lal14g0920 198 PANTHER NAC TRANSCRIPTION FACTOR 56 6 195 - -
Lal14g0920 198 Pfam No apical meristem (NAM) protein 10 129 IPR003441 GO:0003677|GO:0006355
Lal14g0920 198 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0920 Lal-Chr14 11607787 11609945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0920 1 164 NAC Transcription Factor Family AT1G61110 41.667 6.42e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal14g0920 NAM 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0920 - - gmx:100813096 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0920 14 11607787 11609945 Lal14g0920 14 11607787 11609945 ECH
Lal14g0920 14 11607787 11609945 Lal5g1827 5 20041457 20045855 PCT
Lal5g1827 5 20041457 20045855 Lal14g0920 14 11607787 11609945 PCT