Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0874 ATGGTGCGTATGCACAGTAGCGGTAAGGGTATTTTAAGTTCAGCTCTTCCTTACAATGTTGTTGAGGAGAACATTTGCAAGTTTGGCAAGAAGGGTCTGACTCCATCTCAAATTGGTCTTGCTCCTGAAATACCCGAATATCTGTATCACGATCAGAAGGCAGTCTCTATCAGGAAGCACTTGGAGAGGAATAGGAAGGATAAAGATTCAAAATTCAGGCTAATTTTGGTTGAAAGTAGGATCCATTGCCTTGCTCGTTACTATACGAAGACAAAGAAGCTTCCACCTTTATGGGAATATGAATCAACAACAGCCAGCACTCTTGTGGCTTAA 333 0.4174 MVRMHSSGKGILSSALPYNVVEENICKFGKKGLTPSQIGLAPEIPEYLYHDQKAVSIRKHLERNRKDKDSKFRLILVESRIHCLARYYTKTKKLPPLWEYESTTASTLVA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0874 110 PANTHER 40S RIBOSOMAL PROTEIN S13 1 39 - -
Lal14g0874 110 PANTHER 40S RIBOSOMAL PROTEIN S13 39 110 - -
Lal14g0874 110 SMART Ribosomal_S13_N_2 1 55 IPR012606 GO:0003735|GO:0005840|GO:0006412
Lal14g0874 110 SMART Ribosomal_S15_2 30 108 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lal14g0874 110 SUPERFAMILY S15/NS1 RNA-binding domain 52 101 IPR009068 -
Lal14g0874 110 Pfam Ribosomal protein S15 52 103 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lal14g0874 110 PANTHER RIBOSOMAL PROTEIN S15P/S13E 1 39 IPR023029 -
Lal14g0874 110 PANTHER RIBOSOMAL PROTEIN S15P/S13E 39 110 IPR023029 -
Lal14g0874 110 ProSitePatterns Ribosomal protein S15 signature. 57 87 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lal14g0874 110 CDD Ribosomal_S15p_S13e 42 102 IPR000589 GO:0003735|GO:0005840|GO:0006412
Lal14g0874 110 Gene3D - 42 110 - -
Lal14g0874 110 Pfam Ribosomal S13/S15 N-terminal domain 1 40 IPR012606 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0874 Lal-Chr14 11150990 11159092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0874 1 110 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 61.589 2.02e-53 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0874 K02953 - gmx:100790163 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0874 14 11150990 11159092 Lal14g0874 14 11150990 11159092 ECH