Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0857 ATGGCATCATTTAACTTTATAATAACACTTCTTCTAATCCTTCCCTTTTTATTTTCCTCTATTGTCTCTAGTTACTCCTTGAGTGACATAAAAAATTGGTGTAGCCAAACCCCTAACCCTAAGCCATGTGAGTACTATTTATCCAATCATGCTTTCAACAAACCCATAAAAAACAAGTCTGATTTTCTTAAAGTGTCCTTACAACTCGCCTTAGATAGAGCACAAAAAGGCCAAGAAAATACTCATTCACTTGGCCCTAAGTGCAGGAACTCAAAAGAAAGAGCTGCATGGGATGATTGCCTTGAACTCTATGAATACACCATTCAAAGGCTCAATAAAACCATAGACCCTAACACAAAGTGCACAAAAGTTGATTCACAAACATGGCTCAGCACAGCTCTAACAAACCTAGAGACATGTAAAGCTGGGTTCTATGACCTTGGTGTTTCAGATTATGTGTTACCCTTGTTGTCCAATAATGTTACTAAGTTGATAAGCAACACCTTGTCATTGAACAAGGTTCCTTACCAACAACAAAGTTACAAAGATGGGTTCCCAACATGGGTCAAGCCCGGTGACAGGAAACTTTTGCAATCATCTTCTGCAGCTTCTAAGGCTAATGTGGTGGTTGCTAAAGATGGTTCAGGAAAGTATACTACATTAAAAGCAGCAATTGATGCTGCACCAAAGAGTAGTAGTGGAAGGTATATTATATATGTGAAGACAGGTACATACAATGAACAAATTGAGATAAAAGCAAAGAATATCATGTTGGTAGGAGATGGTATTGGCAAGACCATTATCACAGGTAGCAAAAGTGTTGGTGGGGGAAGCACAACTTTCAAATCCGCCACTGTTGCTGCTGTTGGGGATGGATTTATTGCTCAATCCATCACAATTAGAAACACTGCAGGAGCAACAAATCACCAAGCTGTGGCACTACGTTCTGGCTCTGACCTATCAGTATTTTACAAATGTAGCTTTGAAGGTTACCAAGACACACTATATGTTCATTCAGAGAGACAATTTTATAGGGAGTGTAACATCTATGGTACAGTTGATTTTATCTTTGGTAATGCAGCTGTTGTTTTACAAAATTGTAACATTTATGCAAGAACACCTCCTCAAAAAACCATAACAGTTACAGCTCAAGGTAGAACTGATCCTAACCAAAACACTGGAATTATCATTCATAACTCTAAGGTTACAGGTGCATCAGGTTTTAGCTCAACTTCAGTAAAATCATATCTAGGGAGGCCATGGAAAGAATACTCAAGAACAGTATTCATGAAAACTTTCCTTGATAGTTTGATAAAACCAGAAGGGTGGATGGAATGGGATGGAAATTTTGCTTTGAATACTTTATACTATGCTGAGTATGCAAACACAGGTCCAGGTTCTTCCACCAATAATCGAGTAAAATGGAAGGGTTATCATGTTCTTACTAGTTCATCTCAGGCATCACCATTCACAGTTGGAAACTTTATTGCTGGTAATTCATGGTTACCCGCCACTGGTGTTCCTTTTACTTCTGGGCTTTAA 1542 0.3846 MASFNFIITLLLILPFLFSSIVSSYSLSDIKNWCSQTPNPKPCEYYLSNHAFNKPIKNKSDFLKVSLQLALDRAQKGQENTHSLGPKCRNSKERAAWDDCLELYEYTIQRLNKTIDPNTKCTKVDSQTWLSTALTNLETCKAGFYDLGVSDYVLPLLSNNVTKLISNTLSLNKVPYQQQSYKDGFPTWVKPGDRKLLQSSSAASKANVVVAKDGSGKYTTLKAAIDAAPKSSSGRYIIYVKTGTYNEQIEIKAKNIMLVGDGIGKTIITGSKSVGGGSTTFKSATVAAVGDGFIAQSITIRNTAGATNHQAVALRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECNIYGTVDFIFGNAAVVLQNCNIYARTPPQKTITVTAQGRTDPNQNTGIIIHNSKVTGASGFSSTSVKSYLGRPWKEYSRTVFMKTFLDSLIKPEGWMEWDGNFALNTLYYAEYANTGPGSSTNNRVKWKGYHVLTSSSQASPFTVGNFIAGNSWLPATGVPFTSGL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0857 513 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 174 IPR035513 -
Lal14g0857 513 PANTHER PECTINESTERASE 6 512 - -
Lal14g0857 513 PANTHER PECTINESTERASE 6 512 - -
Lal14g0857 513 SMART PMEI_2 25 171 IPR006501 GO:0004857
Lal14g0857 513 Pfam Pectinesterase 207 499 IPR000070 GO:0030599|GO:0042545
Lal14g0857 513 CDD PMEI-like_3 33 173 - -
Lal14g0857 513 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Lal14g0857 513 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Lal14g0857 513 Pfam Plant invertase/pectin methylesterase inhibitor 29 171 IPR006501 GO:0004857
Lal14g0857 513 Gene3D - 201 513 IPR012334 -
Lal14g0857 513 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 174 IPR035513 -
Lal14g0857 513 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 174 IPR006501 GO:0004857
Lal14g0857 513 SUPERFAMILY Pectin lyase-like 201 512 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0857 Lal-Chr14 10959180 10962772 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0857 1 513 Carbohydrate Esterase AT2G45220 67.442 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0857 K01051 - gmx:100782892 860.522