Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0855 GCTATAGGAAAGCTTCCAACTATGGTATTATTTCGCTGGCTAATAACGCTATTAATCGTCCCCTTTTTGTTTTCCTCTACTGTCTCTGGTTACTCATTGAGTGACATCAAAAAATGGTGTAGCCAAACCCCTAACCCTAAGCCATGTGAGTATTATTTGAGCGATAATGCTTTCAACAAACCCATTAAAAACAAGTCTGATTTTCTTAAAGTGTCCTTACAAGTTGCCTTAGATCAAGCACAGAAAGGCCAAGAAAACACTAAGTCACTTGGTCCTAAGTGCCGGAACTCACAAGAAAGAGCTGCATGGGCTGATTGCCTTGAACTCTATGAGTACACCATTCAAAGGCTCAACGAAATCTTAGACCCTAACACAAAGTTCACACAAGTTGATGCTCAAACATGGCTCAGCACAGCTCTAACAAACCTGGAGACATGCAAAGATGGGTTCTATGACCTTAGTGTTTCAGATCATGTGTTACCCTTGTTGTCCAATAATGTTACTAAGTTGATAAGCAATGCTTTGTCTTTGAACAAGGTTTCTGACCAACAACAAAGTTACAAAGATGGGTTCCCAACATGGGTCAAGCCCAGTGACCGGAAGCTGTTGCGATCATCTTATGCATTTGCTAAGGCAAATGTGGTGGTTGCTAAAGATGGGTCAGGCAAATACAAAACAGTGAAAGCAGCAATTGATGCTGCACCACAGAATAGCAATGACAGGTATGTTATATATGTGAAGCAAGGTACATACGATGAACAAATTGTGATAAAAGCAAAGAATATCATGTTGGTAGGAGATGGTATTGGCAAGACCATTATCTCAGGTAGTAAAAGCGTTCAAGGGGGAAGCACAACCTTCAATTCCGCCACAGTTGGTGCTGATGGGTATGGATTTATGGCTCAATACATCACATTTAGAAACACTGCATCAACTAGCCAAGCCGTGGCACTACGTTCTGGCTCAGATAATTCAGTTTTTTACAAATGTGGTTTTGAAGGTTACCAAGACACACTATATGTTATTTCACAGAGACAATTTTATAGAGAGTGTGACATCTATGGTACAGTTGATTTTATCTTTGGTAATGCAGCTGTTGTTTTTCAAAATTGTAACATTTATGCAAGAAATGGTTATCAAAATACAGTAACAGTTACAGCTCAAGGTCGAACCGATTCAAACCAAAACACCGGAATTATCATTCATAACTCTAAGTTTACAGGTGCCCCAGGTTTTAAGTCAAATTCAGTAAAATCATATCTAGGGAGACCATGGAAACAATACTCAAAAACAGTGGTCATGAAAACTTTCCTTGATGGTTTGTTAAACCCAGAAGGTTGGATGAAATGGGATGGAAATTTCGCATTGGATACTCTATATTATGCTGAGTATGCAAACACTGGTCCAGGTTCCTCCACCAAGAATCGGGTGAAATGGAGAGGTTATGAGGCTATTACTAGTGCATCTAAGGCTGAGCCATTCACAGTTGGAAGGTTTATTGATGGTAACTCATGGTTACCGGCCACTAGTGTGCCTTTTACTCCTGGGCTTTAA 1554 0.4003 AIGKLPTMVLFRWLITLLIVPFLFSSTVSGYSLSDIKKWCSQTPNPKPCEYYLSDNAFNKPIKNKSDFLKVSLQVALDQAQKGQENTKSLGPKCRNSQERAAWADCLELYEYTIQRLNEILDPNTKFTQVDAQTWLSTALTNLETCKDGFYDLSVSDHVLPLLSNNVTKLISNALSLNKVSDQQQSYKDGFPTWVKPSDRKLLRSSYAFAKANVVVAKDGSGKYKTVKAAIDAAPQNSNDRYVIYVKQGTYDEQIVIKAKNIMLVGDGIGKTIISGSKSVQGGSTTFNSATVGADGYGFMAQYITFRNTASTSQAVALRSGSDNSVFYKCGFEGYQDTLYVISQRQFYRECDIYGTVDFIFGNAAVVFQNCNIYARNGYQNTVTVTAQGRTDSNQNTGIIIHNSKFTGAPGFKSNSVKSYLGRPWKQYSKTVVMKTFLDGLLNPEGWMKWDGNFALDTLYYAEYANTGPGSSTKNRVKWRGYEAITSASKAEPFTVGRFIDGNSWLPATSVPFTPGL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0855 517 Pfam Plant invertase/pectin methylesterase inhibitor 35 177 IPR006501 GO:0004857
Lal14g0855 517 PANTHER PECTINESTERASE 12 516 - -
Lal14g0855 517 SUPERFAMILY Pectin lyase-like 208 516 IPR011050 -
Lal14g0855 517 CDD PMEI-like_3 39 179 - -
Lal14g0855 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 180 IPR035513 -
Lal14g0855 517 ProSitePatterns Pectinesterase signature 1. 238 257 IPR018040 -
Lal14g0855 517 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Lal14g0855 517 Pfam Pectinesterase 213 503 IPR000070 GO:0030599|GO:0042545
Lal14g0855 517 PANTHER PECTINESTERASE 12 516 - -
Lal14g0855 517 SMART PMEI_2 31 177 IPR006501 GO:0004857
Lal14g0855 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 179 IPR035513 -
Lal14g0855 517 Gene3D - 208 517 IPR012334 -
Lal14g0855 517 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0855 Lal-Chr14 10923822 10929817 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0855 8 517 Carbohydrate Esterase AT2G45220 62.016 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0855 K01051 - gmx:100782892 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0855 14 10923822 10929817 Lal14g0855 14 10923822 10929817 ECH