Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0853 ATGCAAGCACCCAAAATGGCATTACTCCGTTTGCTAGTAACACTATTATTCGTCCCCTTTCTGTTTTCCTCTACTGTCTCTAGTTACTCTTTGAGTGACATCAAAAAATGGTGTAGCCAAACCCCTAACCCTAAGCCATGTGAGTACTATTTGTCCAATAATGCTTTCAACAAACACATAAAAAACAAGTCTGATTTTCTTAAAGTGTCCTTACAACTCGCCTTAGATCAAGCACAAAAAGGCCAAGAAACCATTCAGTCACTTGGTCCTAAGTGGAAGAACTCACAAGAAAGAGCTGCATGGGCTAATTGCCTTGAGCTCTCTGAGAACACCATTCAAATGCTCAACAAAACCATAGACCCTAACACAAAATTCACACAATTTGATGCTCAAATATGGCTCAGCACAGCTCTAACTAACCTGGAGACATGCAAAGATGGGTTCAATGACATTGGTGTTTCAGATTATGTGTTACCCTTATTGTCCAGTAATGTTACTAAGTTGATAAGCAACACCTTGTCGTTGAACAAGGTTCCTTACCGACAACAAAGTTACAAAGATGGGTTTCCAACATGGGTCAAGCCCATAGACGGGAAGCTGTTGGGATCATCTTATGCATTTGCTCTGGCTAATGTGGTGGTTGCTAAAGATGGGTCAGGCAAATACACAACGGTGAAAGAAGCAGTTGATTGTGCACCACAGAGTAGCGATGAGAGGTATGTTATATATGTGAAAGAAGGTACATACGATGAACAATTTGTGATAAAAGCAAAGAATATCATGTTGGTAGGAGATGGTATTGGCAAGACCATTATCACAGGTTGCAAAAGTGTTGTTGGGGGAAGCACAACCATAGATTCCGCCACAGTTGGTGTTGATGCATATGGATTCATGGCTCAATACATCACATTTAGAAACACAGCAGGAGCAGCAAGTAACCAATCTGTGGCACTACGTTCTAACTCTGATCATTCAGTATTTTACCAATGTGGCTTTGAAAGTTACCAAGACACACTATGGGTTCAAACAGGGAGGCAATTTTATAGGGAGTGTGACATCTATGGTACAGTTGATTTTATCTTTGGTGATGCAGCTGCTGTTTTTCAAAATTGTAACATTTATGCAAGAAACGGTCCTCAAAATACAGTAACAGTCACAGCTCAAGGTCGAACCGATCCAAACGAAGCTAGCGGAATTATCATTAGTAACTCAAAGATTACAGGTGCCCCAGATTTTAACTCAAATTCAGTAAAATCATATCTAGGGAGGCCATGGAAAGAATACTCAAAAACAGTGGTCATGCAAACTTTCATTGATAGTTTCATAAACCCAGAAGGTTGGTTGGAATGGGATGGAAATTTCGCATTGGATACTCTATGCTATGCTGAGTATGCAAACACTGGTCCAGGTTCCTCTACCGAGAATCGGGTGAAATGGAAGGGTTACGAAGTTATTACTGATGCATCTCAGGCTGAGCAATTCACAGTTGGAATGTTTATTGATGGTAATTCATGGTTACCGGCGACCGGTGTGCCTTTTACTTCTGGGCTTTAA 1554 0.408 MQAPKMALLRLLVTLLFVPFLFSSTVSSYSLSDIKKWCSQTPNPKPCEYYLSNNAFNKHIKNKSDFLKVSLQLALDQAQKGQETIQSLGPKWKNSQERAAWANCLELSENTIQMLNKTIDPNTKFTQFDAQIWLSTALTNLETCKDGFNDIGVSDYVLPLLSSNVTKLISNTLSLNKVPYRQQSYKDGFPTWVKPIDGKLLGSSYAFALANVVVAKDGSGKYTTVKEAVDCAPQSSDERYVIYVKEGTYDEQFVIKAKNIMLVGDGIGKTIITGCKSVVGGSTTIDSATVGVDAYGFMAQYITFRNTAGAASNQSVALRSNSDHSVFYQCGFESYQDTLWVQTGRQFYRECDIYGTVDFIFGDAAAVFQNCNIYARNGPQNTVTVTAQGRTDPNEASGIIISNSKITGAPDFNSNSVKSYLGRPWKEYSKTVVMQTFIDSFINPEGWLEWDGNFALDTLCYAEYANTGPGSSTENRVKWKGYEVITDASQAEQFTVGMFIDGNSWLPATGVPFTSGL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0853 517 ProSitePatterns Pectinesterase signature 1. 236 255 IPR018040 -
Lal14g0853 517 Pfam Plant invertase/pectin methylesterase inhibitor 33 175 IPR006501 GO:0004857
Lal14g0853 517 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 178 IPR006501 GO:0004857
Lal14g0853 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 178 IPR035513 -
Lal14g0853 517 PANTHER PECTINESTERASE 9 516 - -
Lal14g0853 517 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Lal14g0853 517 SUPERFAMILY Pectin lyase-like 210 516 IPR011050 -
Lal14g0853 517 CDD PMEI-like_3 37 177 - -
Lal14g0853 517 Gene3D - 208 517 IPR012334 -
Lal14g0853 517 Pfam Pectinesterase 211 503 IPR000070 GO:0030599|GO:0042545
Lal14g0853 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 178 IPR035513 -
Lal14g0853 517 SMART PMEI_2 29 175 IPR006501 GO:0004857
Lal14g0853 517 PANTHER PECTINESTERASE 9 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0853 Lal-Chr14 10789869 10791934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0853 6 517 Carbohydrate Esterase AT2G45220 58.252 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0853 K01051 - gmx:100782892 722.62