Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0851 ATGGCACCATTCCGGTTGCTAGTAATACTGTTAATCATTCCCTTTATGTTTTCCTCAATTGTCTCTAGTTACTCTTTGAGTGACATAAAAAAATGGTGTAGCAAAACCCCTAACCCTAAGCCATGTGAATACTATTTATCCAATAATGCTTTTAACAAACCCATAAAAAACAAGTCTGATTTTCTTAAAGTGTCCTTACAACTTGCCTTAGATCAAGCACAAAAAGGCCAAGAAAACATTCAGTCACTTGATCCTAAGTGGCATACCTCACAAGAAAGAGCTGCATGGGCTAGTTGCCTTGAGCTCTATGAGGACACCATTGAAATGCTCAACAAAACCATAGACCCTAACACAAAGTTCACACAAGTTGATGCTCAAATATGGCTCAGCACAGCTCTAACTAACCTCGAGACATGCAAAGATGGGTTCAAAGAACTTGGTGTTTTAGATTATGTGTTACCCTTATTGTCCAATAATGTTACTAAGTTGATAAGCAACACCTTGTCTTTGAACAAGGTTCCTTACCAACAACAAAGTTACAAAAATGGGTTTCCAACATGGGTCAAGCCCAGAGACGGGAAGCTGTTGCGATCATCTTATTCATTTGCTCAGGCTAATGTGGTGGTTGCTAAAGATGGGTCAGGCAAATACAAAACAGTGAAAGAAGCAATTGATGCTGCACCACAGAGTAGCAATGAGAGGTATGTTATATATGTGAAGCAAGGTACATACAATGAAGATTTTGTGATAAAAGCACAGAATATCATGTTGGTAGGAGATGGTATTGGCAAGACCATTATCACAGGTAGCAAAAGTGTTGGAGGGGGCAGCATAACCATCAATACAGCCACAGTTGGTGTTGATGCATATGGATTTATGGCTCAATACATCACATTTAGAAACGCCGCAGGAGCAGCAAGTAACCAAGCCGTGGCACTACGTTCTAACTCAGATCATTCAGTATTTTACCAATGTGGCTTTGAAGGTTACCAAGACACGCTACTTGTTCAATCAGGGAGGCAATTTTATAGGGAGTGTGACATCTATGGTACAGTTGATTTTATCTTTGGTGATGCAGCTGCTGTTTTTCAAAATTGTAACATTTATGCAAGAAACGGTCCTCAAAATACAGTAACAGTCACAGCTCAAGGTCGAACCGATCCAAACCATGCTAGCGGAATTATCATTCAAAACTCAAAGATTACAGGAGCCCCAGATTTTAACTCAAAATCAGTAAAATCATATCTAGGGAGGCCATGGAAAGAATACTCAAAAACAGTGGTCATGCAAACTTTCATTGATAGTTTCATAAACCCAGAAGGTTGGATGGAATGGGATGGAAATTTCGCATTAAATACTCTATACTATGCTGAGTATGCAAACACTGGTCCAGGTTCCTCAACCAAGAATCGGGTGAAATGGAAGGGTTACGAGGTTATTACTAGTGCATCTAAGGCTGAGCCATTCACAGTTGGAAAGTTTATTGATGGTAATTCATGGTTACCGGCTACTAGTGTGCCTTTTACTTCTGGACTTTAA 1539 0.3977 MAPFRLLVILLIIPFMFSSIVSSYSLSDIKKWCSKTPNPKPCEYYLSNNAFNKPIKNKSDFLKVSLQLALDQAQKGQENIQSLDPKWHTSQERAAWASCLELYEDTIEMLNKTIDPNTKFTQVDAQIWLSTALTNLETCKDGFKELGVLDYVLPLLSNNVTKLISNTLSLNKVPYQQQSYKNGFPTWVKPRDGKLLRSSYSFAQANVVVAKDGSGKYKTVKEAIDAAPQSSNERYVIYVKQGTYNEDFVIKAQNIMLVGDGIGKTIITGSKSVGGGSITINTATVGVDAYGFMAQYITFRNAAGAASNQAVALRSNSDHSVFYQCGFEGYQDTLLVQSGRQFYRECDIYGTVDFIFGDAAAVFQNCNIYARNGPQNTVTVTAQGRTDPNHASGIIIQNSKITGAPDFNSKSVKSYLGRPWKEYSKTVVMQTFIDSFINPEGWMEWDGNFALNTLYYAEYANTGPGSSTKNRVKWKGYEVITSASKAEPFTVGKFIDGNSWLPATSVPFTSGL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0851 512 PANTHER PECTINESTERASE 4 511 - -
Lal14g0851 512 ProSitePatterns Pectinesterase signature 1. 231 250 IPR018040 -
Lal14g0851 512 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 173 IPR035513 -
Lal14g0851 512 PANTHER PECTINESTERASE 4 511 - -
Lal14g0851 512 Pfam Pectinesterase 206 498 IPR000070 GO:0030599|GO:0042545
Lal14g0851 512 Gene3D - 200 512 IPR012334 -
Lal14g0851 512 Pfam Plant invertase/pectin methylesterase inhibitor 28 170 IPR006501 GO:0004857
Lal14g0851 512 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 173 IPR006501 GO:0004857
Lal14g0851 512 SUPERFAMILY Pectin lyase-like 201 511 IPR011050 -
Lal14g0851 512 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 173 IPR035513 -
Lal14g0851 512 SMART PMEI_2 24 170 IPR006501 GO:0004857
Lal14g0851 512 ProSitePatterns Pectinesterase signature 2. 348 357 IPR033131 -
Lal14g0851 512 CDD PMEI-like_3 32 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0851 Lal-Chr14 10770345 10772318 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0851 1 512 Carbohydrate Esterase AT2G45220 59.884 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0851 K01051 - gmx:100782892 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0851 14 10770345 10772318 Lal14g0851 14 10770345 10772318 ECH