Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0845 ATGTCTGCCTCATCCACTTCCTTTTCACCGGACCAACAACAACACCAACTCTCTCCCTCCGACCAACTCTGTTATGTTCATTGCAACTTCTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGCACTAGTTTGTTCAAGACTGTGACTGTGAGATGTGGCCATTGCACCAACCTTCTGTCTGTGAACATGCGTGGGCTTCTTCTTCCTCCTGCTAATCAGCTTCACGTTGGCCACAACTTCTTCACTCCTCAAAATCTTATGGAGGAGATTCGAAATGCACCTTCAACAAATATGATGATGAATCAGCTTCCTAACCAAAATGATTTGGTCATGAGCACCATGCGAGGAGGACCAGAAGAAATCCCTAAGCCTCCACCACCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATTCAACGTATAAAAGCTGGAAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCTCATTTCCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTGCGCCAGGAATCAGAAGACGTGCTTATGAAAGATGGGTTTTTCGCACCGGCAAATGTAGGTGTTACCCCCTACTAA 657 0.4627 MSASSTSFSPDQQQHQLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPPANQLHVGHNFFTPQNLMEEIRNAPSTNMMMNQLPNQNDLVMSTMRGGPEEIPKPPPPNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQESEDVLMKDGFFAPANVGVTPY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0845 218 Gene3D High mobility group box domain 122 180 IPR036910 -
Lal14g0845 218 PANTHER PROTEIN YABBY 4 1 216 - -
Lal14g0845 218 MobiDBLite consensus disorder prediction 113 136 - -
Lal14g0845 218 Pfam YABBY protein 19 182 IPR006780 GO:0007275
Lal14g0845 218 PANTHER PROTEIN YABBY 6-RELATED 1 216 IPR006780 GO:0007275
Lal14g0845 218 SUPERFAMILY HMG-box 127 176 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0845 Lal-Chr14 10653582 10657135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0845 30 216 C2C2-YABBY Transcription Factor Family AT4G00180 62.857 2.66e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lal14g0845 YABBY 4.2e-74 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0845 K25796 - gmx:100781267 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0845 14 10653582 10657135 Lal19g0254 19 2490366 2494146 LSH